RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 FOXB2Q5VYV0 432 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 NPNTQ6UXI9 565 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 ABHD15Q6UXT9 468 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 PPFIBP2Q8ND30 876 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 ATG4CQ96DT6 458 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 IFT43Q96FT9 208 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 SRPK1Q96SB4 655 aaKnown RBP11.4□□□□□ -0.58
SNIP1-204ENST00000638725 GMLQ99445 158 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 ZNF395Q9H8N7 513 aaPredicted RBP11.4□□□□□ -0.58
SNIP1-204ENST00000638725 CYTH4Q9UIA0 394 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 EFR3BQ9Y2G0 817 aa11.4□□□□□ -0.58
SNIP1-204ENST00000638725 KRT7P08729 469 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 EIF4BP23588 611 aaKnown RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 HSF5Q4G112 596 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 MEX3CQ5U5Q3 659 aaKnown RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 AP1ARQ63HQ0 302 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 ZBTB33Q86T24 672 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 HSPH1Q92598 858 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CFAP36Q96G28 342 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 PORCNQ9H237 461 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 PGAP2Q9UHJ9 254 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CCDC195A0A1B0GUA6 201 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 TRIM49D1C9J1S8 452 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 COPEO14579 308 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 MAP3K7O43318 606 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CDH5P33151 784 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 ABCD1P33897 745 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 NAMPTP43490 491 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CACNA2D1P54289 1103 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CES4AQ5XG92 561 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 APLFQ8IW19 511 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CTAGE3PQ8IX95 158 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 KCTD6Q8NC69 237 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 RBM15BQ8NDT2 890 aaKnown RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CLPTM1LQ96KA5 538 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CALN1Q9BXU9 219 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 FRMD8P1Q9BZ68 369 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 ZNF518BQ9C0D4 1074 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 NIF3L1Q9GZT8 377 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 IQCGQ9H095 443 aaKnown RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 RPAP3Q9H6T3 665 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 ZNF212Q9UDV6 495 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 TEX264Q9Y6I9 313 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 APOC4-APOC2K7ER74 178 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 MCF2LO15068 1137 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 APOC2P02655 101 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CD19P15391 556 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 TSHRP16473 764 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 GCLCP48506 637 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 MTMR2Q13614 643 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 ZRSR2Q15696 482 aaKnown RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 TAZQ16635 292 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CWF19L1Q69YN2 538 aaKnown RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 ARID3BQ8IVW6 561 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 BRSK2Q8IWQ3 736 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 THNSL1Q8IYQ7 743 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 PPM1NQ8N819 430 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CCDC110Q8TBZ0 833 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 SPATA18Q8TC71 538 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 PPARGC1AQ9UBK2 798 aaKnown RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 MARCOQ9UEW3 520 aaPredicted RBP11.39□□□□□ -0.59
SNIP1-204ENST00000638725 PCDHGC3Q9UN70 934 aa11.39□□□□□ -0.59
SNIP1-204ENST00000638725 CAPN14A8MX76 684 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 VWA5AO00534 786 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 MAFGO15525 162 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 AP1G2O75843 785 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 SNUPNO95149 360 aaKnown RBP11.38□□□□□ -0.59
SNIP1-204ENST00000638725 IL1BP01584 269 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 SUPT20HL2P0C7V6 817 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 KITP10721 976 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 RAP1GDS1P52306 607 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 PSMC1P62191 440 aaKnown RBP11.38□□□□□ -0.59
SNIP1-204ENST00000638725 TMPRSS15P98073 1019 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 KDSRQ06136 332 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 BST1Q10588 318 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 SUPT20HL1Q3ZLR7 823 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 FAM91A1Q658Y4 838 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 ARHGAP24Q8N264 748 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 GATA6Q92908 595 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 ZNF184Q99676 751 aaPredicted RBP11.38□□□□□ -0.59
SNIP1-204ENST00000638725 DHX33Q9H6R0 707 aaKnown RBP11.38□□□□□ -0.59
SNIP1-204ENST00000638725 POLIQ9UNA4 740 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 KAT6AQ92794 2004 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 A8MXQ7 604 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 CXorf49A8MYA2 514 aaPredicted RBP11.38□□□□□ -0.59
SNIP1-204ENST00000638725 SMAPO00193 183 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 CYB561D2O14569 222 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 KLF11O14901 512 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 ATG7O95352 703 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 UBTFL6P0CB48 400 aaPredicted RBP11.38□□□□□ -0.59
SNIP1-204ENST00000638725 MIPP30301 263 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 ARL2P36404 184 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 ORC1Q13415 861 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 BIRC2Q13490 618 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 KCNJ11Q14654 390 aa11.38□□□□□ -0.59
SNIP1-204ENST00000638725 XRRA1Q6P2D8 792 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms