RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 C1orf131Q8NDD1 294 aaKnown RBP20.49■□□□□ 0.87
HLA-A-209ENST00000638375 OR8K1Q8NGG5 319 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 SUSD6Q92537 303 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 PCDHB18PQ96TA0 734 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 AGPAT1Q99943 283 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 TTLL2Q9BWV7 592 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 PDCL3Q9H2J4 239 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 IL21Q9HBE4 155 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 ABHD10Q9NUJ1 306 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 IL37Q9NZH6 218 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 USP15Q9Y4E8 981 aaPredicted RBP20.49■□□□□ 0.87
HLA-A-209ENST00000638375 C2orf16Q68DN1 1984 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 MBTPS2O43462 519 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 CCR2P41597 374 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 KIF11P52732 1056 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 TFF2Q03403 129 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 IFRD2Q12894 506 aaPredicted RBP20.48■□□□□ 0.87
HLA-A-209ENST00000638375 SMAD4Q13485 552 aaKnown RBP20.48■□□□□ 0.87
HLA-A-209ENST00000638375 TAF12Q16514 161 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 LEXMQ3ZCV2 418 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 ATAT1Q5SQI0 421 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 WDR59Q6PJI9 974 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 ZNF571Q7Z3V5 609 aaPredicted RBP20.48■□□□□ 0.87
HLA-A-209ENST00000638375 CNGA4Q8IV77 575 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 DRC7Q8IY82 874 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 TC2NQ8N9U0 490 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 SPC24Q8NBT2 197 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.48■□□□□ 0.87
HLA-A-209ENST00000638375 KCTD13Q8WZ19 329 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 TRMT2BQ96GJ1 504 aaKnown RBP20.48■□□□□ 0.87
HLA-A-209ENST00000638375 MYRFLQ96LU7 910 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 ASAH2Q9NR71 780 aa20.48■□□□□ 0.87
HLA-A-209ENST00000638375 MYH10P35580 1976 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 RTN3O95197 1032 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-209ENST00000638375 CYP1A1P04798 512 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-209ENST00000638375 PLEKP08567 350 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-209ENST00000638375 MYL4P12829 197 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 RPL34P49207 117 aaKnown RBP20.47■□□□□ 0.87
HLA-A-209ENST00000638375 PDCLQ13371 301 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 SLC5A9Q2M3M2 681 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 PABPC1LQ4VXU2 614 aaKnown RBP20.47■□□□□ 0.87
HLA-A-209ENST00000638375 PRSS36Q5K4E3 855 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 HSFY1Q96LI6 401 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 RIPOR3Q96MK2 946 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 WDR6Q9NNW5 1121 aaKnown RBP20.47■□□□□ 0.87
HLA-A-209ENST00000638375 AVENQ9NQS1 362 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-209ENST00000638375 USP3Q9Y6I4 520 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 GREB1Q4ZG55 1949 aa20.47■□□□□ 0.87
HLA-A-209ENST00000638375 DOCK6Q96HP0 2047 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 NOTCH4Q99466 2003 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 FAM170AA1A519 330 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 FAM92AA1XBS5 289 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 MOSPD3O75425 235 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 TADA3O75528 432 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 LSM8O95777 96 aaKnown RBP20.46■□□□□ 0.87
HLA-A-209ENST00000638375 SERPING1P05155 500 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 YWHAQP27348 245 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 MTHFRP42898 656 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 TKTL1P51854 596 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 NOMO3P69849 1222 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 ADIGQ0VDE8 80 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 TDRD12Q587J7 1177 aaKnown RBP20.46■□□□□ 0.87
HLA-A-209ENST00000638375 GAREM2Q75VX8 874 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 PDZD4Q76G19 769 aaPredicted RBP20.46■□□□□ 0.87
HLA-A-209ENST00000638375 TMEM150AQ86TG1 271 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 TMEM35BQ8NCS4 154 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 STK32AQ8WU08 396 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 TCEAL4Q96EI5 215 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 CPXM1Q96SM3 734 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 SLC4A5Q9BY07 1137 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 POMKQ9H5K3 350 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 LRRC4Q9HBW1 653 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 COMMD8Q9NX08 183 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 ARHGAP20Q9P2F6 1191 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 TJP2Q9UDY2 1190 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 CEP83Q9Y592 693 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 CLUHO75153 1309 aa20.46■□□□□ 0.87
HLA-A-209ENST00000638375 PIK3R2O00459 728 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 F11P03951 625 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 GJA1P17302 382 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 GABRR2P28476 465 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 TAF10Q12962 218 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 CLEC16AQ2KHT3 1053 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 PTPN20Q4JDL3 420 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 CYP4A22Q5TCH4 519 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 NAA35Q5VZE5 725 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 TRIM72Q6ZMU5 477 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 LEMD2Q8NC56 503 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 SHKBP1Q8TBC3 707 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 FBXO32Q969P5 355 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 ULBP1Q9BZM6 244 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 ST7Q9NRC1 585 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 SEPT11Q9NVA2 429 aaKnown RBP20.45■□□□□ 0.86
HLA-A-209ENST00000638375 EHD2Q9NZN4 543 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 THEGQ9P2T0 379 aa20.45■□□□□ 0.86
HLA-A-209ENST00000638375 UXTQ9UBK9 157 aaPredicted RBP20.45■□□□□ 0.86
HLA-A-209ENST00000638375 BZW2Q9Y6E2 419 aaKnown RBP20.45■□□□□ 0.86
HLA-A-209ENST00000638375 E5RJQ4 531 aa20.44■□□□□ 0.86
HLA-A-209ENST00000638375 DDX3XO00571 662 aaKnown RBP eCLIP20.44■□□□□ 0.867e-28■■■□□ 14.6
HLA-A-209ENST00000638375 UNGP13051 313 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms