RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ATAD3BQ5T9A4 648 aa16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 SCAIQ8N9R8 606 aa16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 TSPAN17Q96FV3 270 aa16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 DDX47Q9H0S4 455 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 CCDC22O60826 627 aa16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 SLFNL1Q499Z3 407 aa16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 MRPS31Q92665 395 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 C4orf33Q8N1A6 199 aa16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 SYTL5Q8TDW5 730 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 FBXO32Q969P5 355 aa16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 LRCH1Q9Y2L9 728 aa16.89■□□□□ 0.29
CACNA1A-258ENST00000638029 TSPAN3O60637 253 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 CLEC4GQ6UXB4 293 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 CERKQ8TCT0 537 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 TRIM64A6NGJ6 449 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 ATP6V1B2P21281 511 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 CHD1O14646 1710 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 B3GAT3O94766 335 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 ATP1A3P13637 1013 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 AMD1P17707 334 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 PTPN12Q05209 780 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 ORC1Q13415 861 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 MAPK11Q15759 364 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 TSPAN14Q8NG11 270 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 NLNQ9BYT8 704 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 CYP4F12Q9HCS2 524 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 PTCH1Q13635 1447 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 PRODHO43272 600 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 WEE2P0C1S8 567 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 TFE3P19532 575 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 NPY2RP49146 381 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 ZNF284Q2VY69 593 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 SAPCD2Q86UD0 394 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 PARGQ86W56 976 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 DDHD1Q8NEL9 900 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 C2orf81A6NN90 581 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 CYP26A1O43174 497 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 PRDX5P30044 214 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 NT5DC3Q86UY8 548 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 LRRC49Q8IUZ0 686 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 USP7Q93009 1102 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 BHLHE41Q9C0J9 482 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 TPD52L2O43399 206 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 GUCY1B2O75343 617 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 IFNA16P05015 189 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 SLC11A2P49281 568 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 TRADDQ15628 312 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 CYP20A1Q6UW02 462 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 REXO5Q96IC2 774 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 MYH6P13533 1939 aa16.88■□□□□ 0.29
CACNA1A-258ENST00000638029 VWA5AO00534 786 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 LAMB3Q13751 1172 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 SV2CQ496J9 727 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 PPP1R18Q6NYC8 613 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 APLFQ8IW19 511 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 UTP15Q8TED0 518 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 C18orf8Q96DM3 657 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 CPB2Q96IY4 423 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 SEC16BQ96JE7 1060 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 PRKAG3Q9UGI9 489 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 SYNPO2Q9UMS6 1093 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 LOC100653049A0A140TA62 436 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 FAM25EA8MYX2 175 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 SNAP23O00161 211 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 KRT34O76011 436 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 CSF1RP07333 972 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 FAM45BPQ6NSW5 357 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 LRRC8DQ7L1W4 858 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 PIGKQ92643 395 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 XPO6Q96QU8 1125 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 CPDO75976 1380 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 F5H6K3 240 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 PSMD3O43242 534 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 TRIM49P0CI25 452 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 TRIM49CP0CI26 452 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 NUDT2P50583 147 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 MCCD1P59942 119 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 KLRC3Q07444 240 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 C16orf89Q6UX73 402 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 HPS6Q86YV9 775 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 STRBPQ96SI9 672 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 WBP11Q9Y2W2 641 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 MROH7-TTC4A0A0A0MT08 1334 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 GGPS1O95749 300 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 GH1P01241 217 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 S100A9P06702 114 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 CLTBP09497 229 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 FGRP09769 529 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 EPHB3P54753 998 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 SGSM1Q2NKQ1 1148 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 KRT74Q7RTS7 529 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 TRIM63Q969Q1 353 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 VTA1Q9NP79 307 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 IARS2Q9NSE4 1012 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 C17orf102A2RUQ5 167 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 KLF6Q99612 283 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-258ENST00000638029 EFR3BQ9Y2G0 817 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms