RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 SYNMO15061 1565 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
UBE3A-226ENST00000637886 GRID2IPA4D2P6 1211 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 TAF8Q7Z7C8 310 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 SMG5Q9UPR3 1016 aaKnown RBP13.38□□□□□ -0.27
UBE3A-226ENST00000637886 ZNF335Q9H4Z2 1342 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-226ENST00000637886 EXTL3O43909 919 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 SCGNO76038 276 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 POU1F1P28069 291 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 ADORA1P30542 326 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 C2CD6Q53TS8 623 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 DAB2IPQ5VWQ8 1189 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 CASP12Q6UXS9 341 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 TRMT11Q7Z4G4 463 aaKnown RBP13.38□□□□□ -0.27
UBE3A-226ENST00000637886 WDR60Q8WVS4 1066 aa13.38□□□□□ -0.27
UBE3A-226ENST00000637886 IGSF9BQ9UPX0 1349 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RAG1P15918 1043 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 CYP2A7P20853 494 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 ADD2P35612 726 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 ZNF200P98182 395 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 USP41Q3LFD5 358 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 SLFNL1Q499Z3 407 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 ATP13A4Q4VNC1 1196 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RNF44Q7L0R7 432 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 FAM167BQ9BTA0 163 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 A0A087WZ62 844 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RTN2O75298 545 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 GARTP22102 1010 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 HSPA13P48723 471 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 SMCO1Q147U7 214 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 PDGFCQ9NRA1 345 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 COMMD9Q9P000 198 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 C19orf81C9J6K1 198 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 CDC40O60508 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 AVILO75366 819 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 KRT34O76011 436 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 KLHL17Q6TDP4 642 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 NLRP14Q86W24 1093 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 TMEM114B3SHH9 223 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 ADCY6O43306 1168 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 ZC3H11AO75152 810 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RBP3P10745 1247 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RPL9P32969 192 aaKnown RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 HPCAL1P37235 193 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 PCSK9Q8NBP7 692 aaKnown RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 VPS33BQ9H267 617 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 MYH7P12883 1935 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 AMD1P17707 334 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 SOX11P35716 441 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RAD23BP54727 409 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RPL19P84098 196 aaKnown RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 STAT4Q14765 748 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 PAN2Q504Q3 1202 aaKnown RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RNPEPQ9H4A4 650 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 SNX24Q9Y343 169 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 MAP3K1Q13233 1512 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 SPAG6O75602 509 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 CYP2B6P20813 491 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 PPP2R2AP63151 447 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 PPIL2Q13356 520 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 FAM20CQ8IXL6 584 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 IQCF2Q8IXL9 164 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 DSN1Q9H410 356 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 AXIN2Q9Y2T1 843 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 AAR2Q9Y312 384 aaKnown RBP13.37□□□□□ -0.27
UBE3A-226ENST00000637886 AP4S1Q9Y587 144 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 NUDT2P50583 147 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 TAB1Q15750 504 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 RAD54BQ9Y620 910 aa13.37□□□□□ -0.27
UBE3A-226ENST00000637886 ITGA1P56199 1179 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 ACOX1Q15067 660 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 TRIM43BA6NCK2 446 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 AIM2O14862 343 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 ZBTB7BO15156 539 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-226ENST00000637886 EIF2S3P41091 472 aaKnown RBP13.36□□□□□ -0.27
UBE3A-226ENST00000637886 BCAP31P51572 246 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 TRIM25Q14258 630 aaKnown RBP13.36□□□□□ -0.27
UBE3A-226ENST00000637886 TKFCQ3LXA3 575 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 PYHIN1Q6K0P9 492 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 MIER2Q8N344 545 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 LPAR1Q92633 364 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 RERGQ96A58 199 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-226ENST00000637886 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 ZSWIM6Q9HCJ5 1215 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 MLXIPLQ9NP71 852 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 MYMKA6NI61 221 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 SASH1O94885 1247 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 S100A9P06702 114 aaKnown RBP13.36□□□□□ -0.27
UBE3A-226ENST00000637886 PAX3P23760 479 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 NKX1-1Q15270 411 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-226ENST00000637886 ARIH1Q9Y4X5 557 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-226ENST00000637886 CCL15-CCL14A0A0B4J2E2 113 aa13.36□□□□□ -0.27
UBE3A-226ENST00000637886 MAGEB3O15480 346 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms