RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 NUP93Q8N1F7 819 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 IL17RCQ8NAC3 791 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 MDGA1Q8NFP4 955 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 TMEM174Q8WUU8 243 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
CLN8-214ENST00000637594 FAM84AQ96KN4 292 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 MMS19Q96T76 1030 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 C7orf25Q9BPX7 421 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 MRPL45Q9BRJ2 306 aaKnown RBP9.38□□□□□ -0.91
CLN8-214ENST00000637594 TRIM9Q9C026 710 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 ELOVL4Q9GZR5 314 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 SNX25Q9H3E2 840 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 VRTNQ9H8Y1 702 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 TMEM9BQ9NQ34 198 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 CGNQ9P2M7 1197 aaKnown RBP9.38□□□□□ -0.91
CLN8-214ENST00000637594 NME7Q9Y5B8 376 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 TCHHQ07283 1943 aa9.38□□□□□ -0.91
CLN8-214ENST00000637594 FAM92AA1XBS5 289 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 VPS37CA5D8V6 355 aaPredicted RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 ANTXRLA6NF34 631 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 F8VP50 259 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 RTN3O95197 1032 aaPredicted RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 KAT7O95251 611 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 ADH1CP00326 375 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 APODP05090 189 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 ZDHHC11BP0C7U3 371 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 HNRNPLP14866 589 aaKnown RBP eCLIP9.37□□□□□ -0.91
CLN8-214ENST00000637594 BCKDHBP21953 392 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 YWHAQP27348 245 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 GBP1P32455 592 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 HOXD12P35452 270 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 TUBP50607 506 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 NOVA1P51513 510 aaKnown RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 CLDN10P78369 228 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 IRX4P78413 519 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 CYP24A1Q07973 514 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 EHHADHQ08426 723 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 LMAN2Q12907 356 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 SNRNP35Q16560 246 aaKnown RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 WDR72Q3MJ13 1102 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 PREPLQ4J6C6 727 aaPredicted RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 MDH1BQ5I0G3 518 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 EOGTQ5NDL2 527 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 SH3PXD2AQ5TCZ1 1133 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 PEAR1Q5VY43 1037 aaPredicted RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 FAM173BQ6P4H8 233 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 SLC23A3Q6PIS1 610 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 LPCAT2Q7L5N7 544 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 SYT12Q8IV01 421 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 C12orf56Q8IXR9 622 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 LINC00301Q8NCQ3 95 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 GLIS3Q8NEA6 775 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 PDZD8Q8NEN9 1154 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 ZNF516Q92618 1163 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 SLITRK1Q96PX8 696 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 USP28Q96RU2 1077 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 FNBP1Q96RU3 617 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 TMEM121BQ9BXQ6 578 aaPredicted RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 B3GNT5Q9BYG0 378 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 GZF1Q9H116 711 aaPredicted RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 XYLT2Q9H1B5 865 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 POLMQ9NP87 494 aaPredicted RBP9.37□□□□□ -0.91
CLN8-214ENST00000637594 AGPAT3Q9NRZ7 376 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 INVSQ9Y283 1065 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 STARD13Q9Y3M8 1113 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 CPQQ9Y646 472 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 SPAG17Q6Q759 2223 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 ANAPC1Q9H1A4 1944 aa9.37□□□□□ -0.91
CLN8-214ENST00000637594 SDK1Q7Z5N4 2213 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 ZNF638Q14966 1978 aaKnown RBP9.36□□□□□ -0.91
CLN8-214ENST00000637594 TMEM8BA6NDV4 472 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 SGK1O00141 431 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 GIPC1O14908 333 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 HOXC11O43248 304 aaPredicted RBP9.36□□□□□ -0.91
CLN8-214ENST00000637594 ADAM23O75077 832 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 PPP6R2O75170 966 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 TNNI1P19237 187 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 AP3M2P53677 418 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 CACNA2D1P54289 1103 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 SEC13P55735 322 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 CEBPZQ03701 1054 aaKnown RBP9.36□□□□□ -0.91
CLN8-214ENST00000637594 GAD2Q05329 585 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 MESP2Q0VG99 397 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 MAP7D1Q3KQU3 841 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 HECTD3Q5T447 861 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 EMC10Q5UCC4 262 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 ANO7Q6IWH7 933 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 PAQR9Q6ZVX9 377 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 HS2ST1Q7LGA3 356 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 CYP2U1Q7Z449 544 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 CCDC33Q8N5R6 958 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 ALLCQ8N6M5 410 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 IQUBQ8NA54 791 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 XXYLT1Q8NBI6 393 aa9.36□□□□□ -0.91
CLN8-214ENST00000637594 TXNDC5Q8NBS9 432 aaKnown RBP9.36□□□□□ -0.91
CLN8-214ENST00000637594 B3GALNT2Q8NCR0 500 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms