RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MINPP1Q9UNW1 487 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 MED16Q9Y2X0 877 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 ATP23Q9Y6H3 246 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 TAF6LQ9Y6J9 622 aa3.22□□□□□ -1.89
VIM-210ENST00000637053 MAP3K19Q56UN5 1328 aa3.21□□□□□ -1.89
VIM-210ENST00000637053 TTC41PQ6P2S7 1318 aa3.21□□□□□ -1.89
VIM-210ENST00000637053 EVC2Q86UK5 1308 aa3.21□□□□□ -1.89
VIM-210ENST00000637053 LCHNA4D1U4 455 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CTAGE15A4D2H0 777 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CAPN8A6NHC0 703 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 WTIPA6NIX2 430 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 H3BML4 177 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 AGRPO00253 132 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ACKR2O00590 384 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 AP3D1O14617 1153 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 MAPK13O15264 365 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ZSCAN9O15535 394 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 B3GALT2O43825 422 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 MGEA5O60502 916 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 RANBP6O60518 1105 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 FZD7O75084 574 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ALDH1A2O94788 518 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 POP4O95707 220 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 MLYCDO95822 493 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 IFNB1P01574 187 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SOD2P04179 222 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 S100A9P06702 114 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 RPSAP08865 295 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 DLDP09622 509 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 POLR2MP0CAP2 368 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CTAGE8P0CG41 777 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 TMIGD3P0DMS9 266 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 DLATP10515 647 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 RAG1P15918 1043 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ALOX15P16050 662 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 IFNAR1P17181 557 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 PLCG1P19174 1290 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 MAPK4P31152 587 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 TLX1P31314 330 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 RFC1P35251 1148 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 KRT2P35908 639 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 NNMTP40261 264 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 MC3RP41968 323 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ABCG1P45844 678 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 HSPA7P48741 367 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 DIO1P49895 249 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CPT1AP50416 773 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 FXR1P51114 621 aaKnown RBP eCLIP3.21□□□□□ -1.9
VIM-210ENST00000637053 BLVRAP53004 296 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 PPP5CP53041 499 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 AP3M2P53677 418 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ITGA8P53708 1063 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 HADHBP55084 474 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 PCBP3P57721 371 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 STARD6P59095 220 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ACTR1AP61163 376 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 HAND2P61296 217 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ZNF543Q08ER8 600 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 LRMPQ12912 555 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SNW1Q13573 536 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 SNX1Q13596 522 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 PMS2P11Q13670 270 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 BMPR2Q13873 1038 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 DPYSQ14117 519 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 EFR3AQ14156 821 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 LRRC32Q14392 662 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 LASP1Q14847 261 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 IQCB1Q15051 598 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SMAD2Q15796 467 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 MAPKAPK3Q16644 382 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SLC5A9Q2M3M2 681 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ZACNQ401N2 412 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CFAP221Q4G0U5 840 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CCDC40Q4G0X9 1142 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 AARDQ4LEZ3 155 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 FLYWCH1Q4VC44 716 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 USP39Q53GS9 565 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 TCTE1Q5JU00 501 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 TMEM201Q5SNT2 666 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 PIK3R6Q5UE93 754 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 TAF2Q6P1X5 1199 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 WDR93Q6P2C0 686 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ZC3H14Q6PJT7 736 aaKnown RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 LRSAM1Q6UWE0 723 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ZYG11AQ6WRX3 759 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 UBE2R2Q712K3 238 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 REC114Q7Z4M0 266 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CTAGE6Q86UF2 777 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 HOOK3Q86VS8 718 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ZNF761Q86XN6 746 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 DENND1CQ8IV53 801 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 P3H2Q8IVL5 708 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 CTAGE4Q8IX94 777 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 NXPE1Q8N323 547 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 ZNF655Q8N720 491 aaPredicted RBP3.21□□□□□ -1.9
VIM-210ENST00000637053 CLRN3Q8NCR9 226 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 SMC1BQ8NDV3 1235 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 NUP43Q8NFH3 380 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 LINS1Q8NG48 757 aa3.21□□□□□ -1.9
VIM-210ENST00000637053 GRK7Q8WTQ7 553 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms