RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 GYG2O15488 501 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 MAP3K7O43318 606 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 SPAG7O75391 227 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CYP1A1P04798 512 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ITGAVP06756 1048 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ESRRAP11474 423 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 PSMA2P25787 234 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NOP14P78316 857 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 SARNPP82979 210 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 KLC1Q07866 573 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 DNAJC3Q13217 504 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 TFDP3Q5H9I0 405 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 MAP3K21Q5TCX8 1036 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 TRIM68Q6AZZ1 485 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 PLEKHA7Q6IQ23 1121 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ZNF449Q6P9G9 518 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NLRP9Q7RTR0 991 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 POLNQ7Z5Q5 900 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ANKS1BQ7Z6G8 1248 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 UBE2Q1Q7Z7E8 422 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 RFX6Q8HWS3 928 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ALLCQ8N6M5 410 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 SYTL5Q8TDW5 730 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 OPTNQ96CV9 577 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 SPDL1Q96EA4 605 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NAF1Q96HR8 494 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 LRCH3Q96II8 777 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ANKRD36BP1Q96IX9 119 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 FAM167AQ96KS9 214 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NTPCRQ9BSD7 190 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 OSBPL1AQ9BXW6 950 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 IKZF4Q9H2S9 585 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 JPH1Q9HDC5 661 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 WRAP73Q9P2S5 460 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CORO1CQ9ULV4 474 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 TCRBV7S2A1N4TA0A589 114 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 FAM170AA1A519 330 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 MOXD2PA6NHM9 499 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 C2CD2LO14523 706 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 KPNA6O60684 536 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 EDF1O60869 148 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 KRT38O76015 456 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 GSTA2P09210 222 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 TMEM191BP0C7N4 346 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 UNGP13051 313 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ACADSP16219 412 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ITGB5P18084 799 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 VHLP40337 213 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NAMPTP43490 491 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NCOA4Q13772 614 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 RBBP5Q15291 538 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 LLGL1Q15334 1064 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 BBS9Q3SYG4 887 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CMPK2Q5EBM0 449 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 LVRNQ6Q4G3 990 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 MON1BQ7L1V2 547 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ARHGAP18Q8N392 663 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 PDCD7Q8N8D1 485 aaKnown RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 CCDC110Q8TBZ0 833 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 DNAJC9Q8WXX5 260 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 SEMA4DQ92854 862 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ATP2A3Q93084 1043 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NSL1Q96IY1 281 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 GUCD1Q96NT3 240 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 IER2Q9BTL4 223 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 TSSK1BQ9BXA7 367 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NIF3L1Q9GZT8 377 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 MYLK2Q9H1R3 596 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 VPS11Q9H270 941 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 EURLQ9NYK6 297 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 SLC9A2Q9UBY0 812 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 ASTN2O75129 1339 aaPredicted RBP4.16□□□□□ -1.74
SCN1A-214ENST00000637038 NFASCO94856 1347 aa4.16□□□□□ -1.74
SCN1A-214ENST00000637038 COPEO14579 308 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 NVLO15381 856 aaKnown RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 KRT16P08779 473 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 CLTBP09497 229 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 CD19P15391 556 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 YWHAGP61981 247 aaKnown RBP eCLIP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 NOMO3P69849 1222 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 MAMLD1Q13495 774 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 EMC2Q15006 297 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PGM5Q15124 567 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 SGSM1Q2NKQ1 1148 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ZACNQ401N2 412 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 DNAL1Q4LDG9 190 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 FAM47CQ5HY64 1035 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ANKRD20A2Q5SQ80 823 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 NOL9Q5SY16 702 aaKnown RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 ANKRD20A1Q5TYW2 823 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PLA2G4FQ68DD2 849 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PASD1Q8IV76 773 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 KCTD6Q8NC69 237 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 MRRFQ96E11 262 aaKnown RBP4.15□□□□□ -1.74
SCN1A-214ENST00000637038 AGBL1Q96MI9 1066 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 SLITRK1Q96PX8 696 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 PDCD2LQ9BRP1 358 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 KIAA1683Q9H0B3 1180 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 WWP1Q9H0M0 922 aa4.15□□□□□ -1.74
SCN1A-214ENST00000637038 C2orf40Q9H1Z8 148 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms