RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 ZWILCHQ9H900 591 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 KCNK9Q9NPC2 374 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 PSMC3IPQ9P2W1 217 aaPredicted RBP12.97□□□□□ -0.33
PTPN11-205ENST00000635625 USP18Q9UMW8 372 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 PDCD11Q14690 1871 aaKnown RBP12.97□□□□□ -0.33
PTPN11-205ENST00000635625 C2CD4BA6NLJ0 364 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 IL1R2P27930 398 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 MIPP30301 263 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 CDH8P55286 799 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 GRIK4Q16099 956 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 DGKDQ16760 1214 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 DUSP28Q4G0W2 176 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 BOLA3Q53S33 107 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 FAM102AQ5T9C2 384 aaPredicted RBP12.97□□□□□ -0.33
PTPN11-205ENST00000635625 DLK2Q6UY11 383 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 ANKRD23Q86SG2 305 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 UNC93AQ86WB7 457 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 RFX6Q8HWS3 928 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 ARFGAP1Q8N6T3 406 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 TWNKQ96RR1 684 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 TMEM121Q9BTD3 319 aa12.97□□□□□ -0.33
PTPN11-205ENST00000635625 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
PTPN11-205ENST00000635625 DNAJC17Q9NVM6 304 aaKnown RBP12.97□□□□□ -0.33
PTPN11-205ENST00000635625 KAT6AQ92794 2004 aa12.96□□□□□ -0.33
PTPN11-205ENST00000635625 IQCA1LA6NCM1 817 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 CFAP73A6NFT4 308 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 TGM2P21980 687 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 AXLP30530 894 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 SCTRP47872 440 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 IFNAR2P48551 515 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 CTCFP49711 727 aaPredicted RBP12.96□□□□□ -0.34
PTPN11-205ENST00000635625 NDST1P52848 882 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 EIF3EP60228 445 aaKnown RBP12.96□□□□□ -0.34
PTPN11-205ENST00000635625 ROR1Q01973 937 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 TMED2Q15363 201 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 IQSEC1Q6DN90 963 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 CYP4F22Q6NT55 531 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 ARCQ7LC44 396 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 TRPM8Q7Z2W7 1104 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 SESTD1Q86VW0 696 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 SRRM1Q8IYB3 904 aaKnown RBP12.96□□□□□ -0.34
PTPN11-205ENST00000635625 PDIK1LQ8N165 341 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 NAT8LQ8N9F0 302 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 SMC6Q96SB8 1091 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 PRDM16Q9HAZ2 1276 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 SLC5A4Q9NY91 659 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 CTNNAL1Q9UBT7 734 aa12.96□□□□□ -0.34
PTPN11-205ENST00000635625 PRPSAP2O60256 369 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 IFNB1P01574 187 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 MMP3P08254 477 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 GJA5P36382 358 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 GEMIN4P57678 1058 aaKnown RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 FKBP1BP68106 108 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 RNASELQ05823 741 aaKnown RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 PDIA2Q13087 525 aaKnown RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 XRCC4Q13426 336 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 ACVR2BQ13705 512 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 SPARCL1Q14515 664 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 NOMO1Q15155 1222 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 SLC27A1Q6PCB7 646 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 MOB2Q70IA6 237 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 CDR2LQ86X02 465 aaPredicted RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 ZBED8Q8IZ13 594 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 GLIS1Q8NBF1 620 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 BEST2Q8NFU1 509 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 CPT1BQ92523 772 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 ALKBH8Q96BT7 664 aaKnown RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 CPB2Q96IY4 423 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 HS3ST6Q96QI5 342 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 TGS1Q96RS0 853 aaKnown RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 ELAC2Q9BQ52 826 aaKnown RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 GCOM2Q9BZD3 368 aaPredicted RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 ABHD16BQ9H3Z7 469 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 VPS37BQ9H9H4 285 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 GBA2Q9HCG7 927 aaPredicted RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 HAUS2Q9NVX0 235 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 HMGXB4Q9UGU5 601 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 TSPAN16Q9UKR8 245 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 ZMYND8Q9ULU4 1186 aaPredicted RBP12.95□□□□□ -0.34
PTPN11-205ENST00000635625 SLC12A4Q9UP95 1085 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 ARL2BPQ9Y2Y0 163 aa12.95□□□□□ -0.34
PTPN11-205ENST00000635625 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 PDHXO00330 501 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 MDM4O15151 490 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
PTPN11-205ENST00000635625 ZNF189O75820 626 aaPredicted RBP12.94□□□□□ -0.34
PTPN11-205ENST00000635625 VTNP04004 478 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 ZSCAN5DPP0CG00 497 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 ZNF286BP0CG31 522 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 CYP2C8P10632 490 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 GRB14Q14449 540 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 SMTNL2Q2TAL5 461 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 ARHGAP17Q68EM7 881 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 SPATA21Q7Z572 469 aa12.94□□□□□ -0.34
PTPN11-205ENST00000635625 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
PTPN11-205ENST00000635625 KIAA0319LQ8IZA0 1049 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms