RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 KBTBD12Q3ZCT8 623 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 PLEKHG4Q58EX7 1191 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 C1orf228Q6PIY5 440 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 CLNKQ7Z7G1 428 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 LRRC6Q86X45 466 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 APOBEC3FQ8IUX4 373 aaKnown RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 IGDCC3Q8IVU1 814 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 EXOC8Q8IYI6 725 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 SLC4A11Q8NBS3 891 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 CMASQ8NFW8 434 aaPredicted RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 CFAP36Q96G28 342 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 HEXIM2Q96MH2 286 aaKnown RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 FAM111AQ96PZ2 611 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 NUDCD1Q96RS6 583 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 IQCGQ9H095 443 aaKnown RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 SDCBP2Q9H190 292 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 SMYD3Q9H7B4 428 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 SAR1AQ9NR31 198 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 SLC5A4Q9NY91 659 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 HMGXB4Q9UGU5 601 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 PPME1Q9Y570 386 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 CFAP69A5D8W1 941 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 H0Y3Z8 333 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 PIK3R2O00459 728 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 KIF1CO43896 1103 aaKnown RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 HNRNPCL1O60812 293 aaKnown RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 PEX11AO75192 247 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 IL18RAPO95256 599 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 ITGB3P05106 788 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 NFICP08651 508 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 FAAP100Q0VG06 881 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 KRT81Q14533 505 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 ACAP1Q15027 740 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 CDO1Q16878 200 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 SPDYAQ5MJ70 313 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 BZW1Q7L1Q6 419 aaKnown RBP11.18□□□□□ -0.62
PSPC1-207ENST00000635251 CTAGE3PQ8IX95 158 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 TMEM192Q8IY95 271 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 TMEM130Q8N3G9 435 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 UBA3Q8TBC4 463 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 STK32AQ8WU08 396 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 TRAPPC12Q8WVT3 735 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 APOPT1Q96IL0 206 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 SERAC1Q96JX3 654 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 TWNKQ96RR1 684 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 BCO2Q9BYV7 579 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 DONSONQ9NYP3 566 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 HEY2Q9UBP5 337 aa11.18□□□□□ -0.62
PSPC1-207ENST00000635251 TCRBV9S1A1TA0A576 114 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 NFKBIEO00221 500 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 ITGBL1O95965 494 aaPredicted RBP11.17□□□□□ -0.62
PSPC1-207ENST00000635251 TGFB3P10600 412 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 PYGBP11216 843 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 GPD1P21695 349 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 PROZP22891 400 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 TFDP2Q14188 446 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 NOMO1Q15155 1222 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 FAM47CQ5HY64 1035 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 WASHC2DQ5SRD0 308 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 TREML2Q5T2D2 321 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 OR6B2Q6IFH4 312 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 LBX2Q6XYB7 198 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 C1orf127Q8N9H9 656 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 PTPRN2Q92932 1015 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 MCRS1Q96EZ8 462 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 ELOVL4Q9GZR5 314 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 CDT1Q9H211 546 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 PTPRHQ9HD43 1115 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 BTBD7Q9P203 1132 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 PPP1R1BQ9UD71 204 aaPredicted RBP11.17□□□□□ -0.62
PSPC1-207ENST00000635251 LNPEPQ9UIQ6 1025 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 SIX4Q9UIU6 781 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 LCTP09848 1927 aa11.17□□□□□ -0.62
PSPC1-207ENST00000635251 LACTBL1A8MY62 500 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 PRPSAP2O60256 369 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 CCDC22O60826 627 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 AVILO75366 819 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 BGNP21810 368 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 CDC25CP30307 473 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 FAM182AQ5T1J6 154 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 SH3PXD2AQ5TCZ1 1133 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 JADE1Q6IE81 842 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 SCYL2Q6P3W7 929 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 ZNF276Q8N554 614 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 TTC8Q8TAM2 541 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 SLC44A1Q8WWI5 657 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 PEBP4Q96S96 227 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 GPR20Q99678 358 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 TMEM120AQ9BXJ8 343 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 RAB6BQ9NRW1 208 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.16□□□□□ -0.62
PSPC1-207ENST00000635251 TRAFD1O14545 582 aaPredicted RBP11.16□□□□□ -0.62
PSPC1-207ENST00000635251 COPEO14579 308 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 KCNN4O15554 427 aa11.16□□□□□ -0.62
PSPC1-207ENST00000635251 CILPO75339 1184 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms