RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TNNI1P19237 187 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 NR2F2P24468 414 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 GBP1P32455 592 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 LHX1P48742 406 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 RBP5P82980 135 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 CYP24A1Q07973 514 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 NR1H3Q13133 447 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 DMC1Q14565 340 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 PSMD6Q15008 389 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 ELF2Q15723 593 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 NFIL3Q16649 462 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 PLK5Q496M5 336 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 PLA2G2CQ5R387 149 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 LMBRD2Q68DH5 695 aaPredicted RBP16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 RNF43Q68DV7 783 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 TCEAL6Q6IPX3 200 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 SYT13Q7L8C5 426 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 WDR49Q8IV35 697 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 ADGRF2Q8IZF7 708 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 TMEM174Q8WUU8 243 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 ATP2A3Q93084 1043 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 TCEAL3Q969E4 200 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 CCDC127Q96BQ5 260 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 TRMT2BQ96GJ1 504 aaKnown RBP16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 DUSP15Q9H1R2 295 aaPredicted RBP16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 ABCB6Q9NP58 842 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 VPS45Q9NRW7 570 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 KIAA1468Q9P260 1216 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 ITGA11Q9UKX5 1188 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 PCDHGA5Q9Y5G8 931 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 ACACBO00763 2458 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 MYO16Q9Y6X6 1858 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 AKAP3O75969 853 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 APBB3O95704 486 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 PCSK1P29120 753 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 ZNF77Q15935 545 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 DUOXA2Q1HG44 320 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 SOWAHAQ2M3V2 549 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 EDRF1Q3B7T1 1238 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 TRIML1Q8N9V2 468 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 SH3RF2Q8TEC5 729 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 EZH1Q92800 747 aaPredicted RBP16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 MYRFLQ96LU7 910 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 DMAC2Q9NW81 257 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 GDAP2Q9NXN4 497 aa16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 MAGEC2Q9UBF1 373 aaPredicted RBP16.58■□□□□ 0.24
SNRNP48-203ENST00000634363 CAVIN2O95810 425 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 MBD3O95983 291 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 PDGFRBP09619 1106 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 LMO2P25791 158 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 GRIK1P39086 918 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 SEC13P55735 322 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 MYO1EQ12965 1108 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 ADAM9Q13443 819 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 MORC3Q14149 939 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 EML3Q32P44 896 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 ZCWPW2Q504Y3 356 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 C2orf27AQ580R0 203 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 TTC30AQ86WT1 665 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 TOP6BLQ8N6T0 577 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 PKMYT1Q99640 499 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 CGRRF1Q99675 332 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 TPSD1Q9BZJ3 242 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 INTS13Q9NVM9 706 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 SIX4Q9UIU6 781 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 THADAQ6YHU6 1953 aa16.57■□□□□ 0.24
SNRNP48-203ENST00000634363 GABRDO14764 452 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 KCNK5O95279 499 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 ABL1P00519 1130 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 BDNFP23560 247 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 CASP4P49662 377 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 CYP27A1Q02318 531 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 LRRC63Q05C16 580 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 CFAP221Q4G0U5 840 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 KLHL10Q6JEL2 608 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 C4orf50Q6ZRC1 276 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 TSTD1Q8NFU3 115 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 CXorf38Q8TB03 319 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 ACDQ96AP0 544 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 DHTKD1Q96HY7 919 aaPredicted RBP16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 HPDLQ96IR7 371 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 SYT15Q9BQS2 421 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 GCNT4Q9P109 453 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 EPG5Q9HCE0 2579 aa16.56■□□□□ 0.24
SNRNP48-203ENST00000634363 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 MAP1BP46821 2468 aaKnown RBP16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 PTPRJQ12913 1337 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 KIAA1549LQ6ZVL6 1849 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 C4orf47A7E2U8 309 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 CETN3O15182 167 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 MAPK13O15264 365 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 EPB41P11171 864 aaKnown RBP16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 KRT13P13646 458 aa16.55■□□□□ 0.24
SNRNP48-203ENST00000634363 PMLP29590 882 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms