RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 SNHG28P0DPA3 235 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 CYP2C19P33261 490 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 ZNF135P52742 658 aaPredicted RBP4.29□□□□□ -1.72
CHD2-219ENST00000630016 EEFSECP57772 596 aaKnown RBP4.29□□□□□ -1.72
CHD2-219ENST00000630016 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
CHD2-219ENST00000630016 IL10RAQ13651 578 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 RAPGEF1Q13905 1077 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 ZNF260Q3ZCT1 412 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 NGDNQ8NEJ9 315 aaKnown RBP4.29□□□□□ -1.72
CHD2-219ENST00000630016 PRSS22Q9GZN4 317 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 SPRTNQ9H040 489 aaPredicted RBP4.29□□□□□ -1.72
CHD2-219ENST00000630016 STK26Q9P289 416 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 TMA7Q9Y2S6 64 aaKnown RBP4.29□□□□□ -1.72
CHD2-219ENST00000630016 DLC1Q96QB1 1528 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 ATP7BP35670 1465 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 KNDC1Q76NI1 1749 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 NRAPQ86VF7 1730 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 PIK3C2GO75747 1445 aa4.29□□□□□ -1.72
CHD2-219ENST00000630016 ADGRF5Q8IZF2 1346 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 H3BNC9 293 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 ZNF213O14771 459 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 HTRA2O43464 458 aaPredicted RBP4.28□□□□□ -1.72
CHD2-219ENST00000630016 GJB1P08034 283 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 CHRM3P20309 590 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 CDK11BP21127 795 aaKnown RBP4.28□□□□□ -1.72
CHD2-219ENST00000630016 ARHGAP25P42331 645 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 NR4A2P43354 598 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 MASP1P48740 699 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 ACAP2Q15057 778 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 C3orf36Q3SXR2 165 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 RUSC1-AS1Q66K80 236 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 CATSPERGQ6ZRH7 1159 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 KRT73Q86Y46 540 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 GALNT16Q8N428 558 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 FAM109AQ8N4B1 249 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 JADE3Q92613 823 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 ZNF580Q9UK33 172 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 IPPQ9Y573 584 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 SSH2Q76I76 1423 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 CLTCL1P53675 1640 aa4.28□□□□□ -1.72
CHD2-219ENST00000630016 KIAA0232Q92628 1395 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 CAMTA1Q9Y6Y1 1673 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 SMIM35A0A1B0GVV1 85 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 F2RL2O00254 374 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 EXOC5O00471 708 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 TLR5O60602 858 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 C5AR1P21730 350 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 SFPQP23246 707 aaKnown RBP eCLIP4.27□□□□□ -1.73
CHD2-219ENST00000630016 GTF2H3Q13889 308 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 HABP2Q14520 560 aaPredicted RBP4.27□□□□□ -1.73
CHD2-219ENST00000630016 TRIP6Q15654 476 aaKnown RBP4.27□□□□□ -1.73
CHD2-219ENST00000630016 PCID2Q5JVF3 399 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 VPS53Q5VIR6 699 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 PGM2L1Q6PCE3 622 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 SLC4A10Q6U841 1118 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 PNLDC1Q8NA58 520 aaKnown RBP4.27□□□□□ -1.73
CHD2-219ENST00000630016 ATL2Q8NHH9 583 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 PRSS3P2Q8NHM4 247 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 KAT5Q92993 513 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 PRAM1Q96QH2 718 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 NELL2Q99435 816 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 TMEM79Q9BSE2 394 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 GPR35Q9HC97 309 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 SERHLQ9NQF3 203 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 MKS1Q9NXB0 559 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 RAD54BQ9Y620 910 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 CFAP20Q9Y6A4 193 aaKnown RBP4.27□□□□□ -1.73
CHD2-219ENST00000630016 CRB1P82279 1406 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 SPATA31E1Q6ZUB1 1445 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 PPLO60437 1756 aa4.27□□□□□ -1.73
CHD2-219ENST00000630016 POLR3AO14802 1390 aaPredicted RBP4.27□□□□□ -1.73
CHD2-219ENST00000630016 TLDC2A0PJX2 215 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 ANKRD62A6NC57 917 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 CCDC154A6NI56 674 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 MYMKA6NI61 221 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 PPM1DO15297 605 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 PPM1GO15355 546 aaPredicted RBP4.26□□□□□ -1.73
CHD2-219ENST00000630016 SLC16A3O15427 465 aaKnown RBP4.26□□□□□ -1.73
CHD2-219ENST00000630016 VPS4BO75351 444 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 ONECUT2O95948 504 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 RARBP10826 455 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 NCLP19338 710 aaKnown RBP4.26□□□□□ -1.73
CHD2-219ENST00000630016 MALP21145 153 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 CYP2C18P33260 490 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 GCLCP48506 637 aaPredicted RBP4.26□□□□□ -1.73
CHD2-219ENST00000630016 RABEP1Q15276 862 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 SFRP4Q6FHJ7 346 aaPredicted RBP4.26□□□□□ -1.73
CHD2-219ENST00000630016 MIS18BP1Q6P0N0 1132 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 KRT26Q7Z3Y9 468 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 TTC7BQ86TV6 843 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 KCNH5Q8NCM2 988 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 C5orf34Q96MH7 638 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 ASB2Q96Q27 587 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 VRK1Q99986 396 aaPredicted RBP4.26□□□□□ -1.73
CHD2-219ENST00000630016 SLAMF7Q9NQ25 335 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 DLL3Q9NYJ7 618 aa4.26□□□□□ -1.73
CHD2-219ENST00000630016 LIMCH1Q9UPQ0 1083 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms