RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 TTLL2Q9BWV7 592 aa12.17□□□□□ -0.46
PTPN7-219ENST00000629151 SYNCQ9H7C4 482 aa12.17□□□□□ -0.46
PTPN7-219ENST00000629151 SEPT11Q9NVA2 429 aaKnown RBP12.17□□□□□ -0.46
PTPN7-219ENST00000629151 ARHGAP20Q9P2F6 1191 aa12.17□□□□□ -0.46
PTPN7-219ENST00000629151 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
PTPN7-219ENST00000629151 ADAMTS1Q9UHI8 967 aa12.17□□□□□ -0.46
PTPN7-219ENST00000629151 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
PTPN7-219ENST00000629151 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.16□□□□□ -0.46
PTPN7-219ENST00000629151 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 TNFRSF10BO14763 440 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 RTN2O75298 545 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 BEST1O76090 585 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 GLP2RO95838 553 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CALB1P05937 261 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 GLI1P08151 1106 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 MYBL1P10243 752 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 MMP8P22894 467 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CDC25CP30307 473 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 GTF2F1P35269 517 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CYLC1P35663 651 aaPredicted RBP12.16□□□□□ -0.46
PTPN7-219ENST00000629151 SCNN1AP37088 669 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 MTHFRP42898 656 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 TKTL1P51854 596 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 KIF11P52732 1056 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 SLC5A3P53794 718 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 EPHA5P54756 1037 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 NOMO3P69849 1222 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CENPCQ03188 943 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 C1QBPQ07021 282 aaKnown RBP12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 PDCLQ13371 301 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 SLC18A3Q16572 532 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CCDC142Q17RM4 750 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CLEC16AQ2KHT3 1053 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 EFHC1Q5JVL4 640 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 NAA35Q5VZE5 725 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 E4F1Q66K89 784 aaPredicted RBP12.16□□□□□ -0.46
PTPN7-219ENST00000629151 PM20D1Q6GTS8 502 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 PMF1Q6P1K2 205 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 MON1AQ86VX9 555 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 TXLNBQ8N3L3 684 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 WDTC1Q8N5D0 677 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 TTC9BQ8N6N2 239 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 SLC30A5Q8TAD4 765 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 SLC20A1Q8WUM9 679 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 SMG7Q92540 1137 aaKnown RBP12.16□□□□□ -0.46
PTPN7-219ENST00000629151 GOLGA1Q92805 767 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 HLA-CQ95604 372 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 C18orf8Q96DM3 657 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 PDLIM2Q96JY6 352 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 GCNAQ96QF7 691 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 NHEJ1Q9H9Q4 299 aaPredicted RBP12.16□□□□□ -0.46
PTPN7-219ENST00000629151 ASAH2Q9NR71 780 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 ST7Q9NRC1 585 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 SCML2Q9UQR0 700 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 FAM50BQ9Y247 325 aa12.16□□□□□ -0.46
PTPN7-219ENST00000629151 CLUHO75153 1309 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 PLXNA4Q9HCM2 1894 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 DDX3XO00571 662 aaKnown RBP eCLIP12.15□□□□□ -0.461e-6■□□□□ 8.9
PTPN7-219ENST00000629151 RFPL2O75678 378 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ZBED1O96006 694 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 PTMAP06454 111 aaKnown RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 EIF4A3P38919 411 aaKnown RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 GABRB2P47870 512 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 CACNA2D1P54289 1103 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 SPA17Q15506 151 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ASTE1Q2TB18 679 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 SNX30Q5VWJ9 437 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ALKBH5Q6P6C2 394 aaKnown RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 SYCE2Q6PIF2 218 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 EP400NLQ6ZTU2 488 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 TOGARAM2Q6ZUX3 1019 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 PDZD4Q76G19 769 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 BEND5Q7L4P6 421 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 TADA2BQ86TJ2 420 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 PASD1Q8IV76 773 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ZNF276Q8N554 614 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 STKLD1Q8NE28 680 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 GIPC2Q8TF65 315 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ZNF707Q96C28 371 aaPredicted RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 MSLNLQ96KJ4 702 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 CDK5RAP1Q96SZ6 601 aaKnown RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 PCDHB18PQ96TA0 734 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ISCUQ9H1K1 167 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ASNSD1Q9NWL6 643 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 ADAM22Q9P0K1 906 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 CLEC1BQ9P126 229 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 CD207Q9UJ71 328 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 NAGPAQ9UK23 515 aa12.15□□□□□ -0.46
PTPN7-219ENST00000629151 CCL16O15467 120 aa12.14□□□□□ -0.47
PTPN7-219ENST00000629151 LINC01565O15544 149 aa12.14□□□□□ -0.47
PTPN7-219ENST00000629151 SOAT2O75908 522 aa12.14□□□□□ -0.47
PTPN7-219ENST00000629151 CALCAP01258 141 aa12.14□□□□□ -0.47
PTPN7-219ENST00000629151 CFHP08603 1231 aa12.14□□□□□ -0.47
PTPN7-219ENST00000629151 HMGA1P17096 107 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms