RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 GGPS1O95749 300 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 HMGN1P05114 100 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CHRM5P08912 532 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 QDPRP09417 244 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RPS2P15880 293 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CAPN3P20807 821 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PSMA2P25787 234 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MAP4P27816 1152 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PBX2P40425 430 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SCTRP47872 440 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MAPK10P53779 464 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 EPHB4P54760 987 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 STX1BP61266 288 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RNASELQ05823 741 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GRSF1Q12849 480 aaKnown RBP eCLIP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RESTQ13127 1097 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 DPCR1Q3MIW9 517 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PABPC1LQ4VXU2 614 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 HMBOX1Q6NT76 420 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 FOXR2Q6PJQ5 311 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 LDHAL6AQ6ZMR3 332 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GPR141Q7Z602 305 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM228AQ86W67 206 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 LONP2Q86WA8 852 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MIB1Q86YT6 1006 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TICAM1Q8IUC6 712 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TMEM139Q8IV31 216 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CCDC28AQ8IWP9 274 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GPR156Q8NFN8 814 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SCFD1Q8WVM8 642 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GPRASP2Q96D09 838 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 METTL2AQ96IZ6 378 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF285Q96NJ3 590 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CDK5RAP1Q96SZ6 601 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 BCL7BQ9BQE9 202 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 AGXT2Q9BYV1 514 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SENP6Q9GZR1 1112 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 LSG1Q9H089 658 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 C12orf10Q9HB07 376 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 FANCEQ9HB96 536 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TBCCD1Q9NVR7 557 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 KIAA0232Q92628 1395 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ACOD1A6NK06 481 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PRSS44E7EML9 344 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 E7EVH7 732 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SHOXO15266 292 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PGM3O95394 542 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GNAI2P04899 355 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RETP07949 1114 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SNRPAP09012 282 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SRGAP2BP0DMP2 458 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ESRRAP11474 423 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 OSBPP22059 807 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RFC4P35249 363 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MDH1P40925 334 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PTGER2P43116 358 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ACADVLP49748 655 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CCT4P50991 539 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GMFBP60983 142 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ELF3P78545 371 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NR5A1Q13285 461 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GRM3Q14832 879 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 STILQ15468 1287 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 XKR9Q5GH70 373 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM76BQ5HYJ3 339 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 IFIT1BQ5T764 474 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SCYL2Q6P3W7 929 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 LRRC8BQ6P9F7 803 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PIK3AP1Q6ZUJ8 805 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TRMT10CQ7L0Y3 403 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RAB11FIP2Q7L804 512 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 KRT28Q7Z3Y7 464 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 EXOC3L1Q86VI1 746 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC43A2Q8N370 569 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CRACR2BQ8N4Y2 399 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PLBD2Q8NHP8 589 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RNASE11Q8TAA1 199 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 KCNG4Q8TDN1 519 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PSPC1Q8WXF1 523 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ARHGEF26Q96DR7 871 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 STAMBPL1Q96FJ0 436 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CEP170P1Q96L14 293 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NUDCD1Q96RS6 583 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NUP58Q9BVL2 599 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RNF38Q9H0F5 515 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SETD4Q9NVD3 440 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SYBUQ9NX95 663 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CPA4Q9UI42 421 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MAPRE3Q9UPY8 281 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RUVBL1Q9Y265 456 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SIK3Q9Y2K2 1263 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ADGRG1Q9Y653 693 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 USP32Q8NFA0 1604 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TRPC5OSA6NMA1 111 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 FOXO6A8MYZ6 492 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 HSBP1L1C9JCN9 74 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 AGPSO00116 658 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 DPYSL4O14531 572 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SPOPO43791 374 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CRTAMO95727 393 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms