RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 B3GNT5Q9BYG0 378 aa14.39□□□□□ -0.11
TCF4-262ENST00000628078 SLC39A2Q9NP94 309 aa14.39□□□□□ -0.11
TCF4-262ENST00000628078 VPS45Q9NRW7 570 aa14.39□□□□□ -0.11
TCF4-262ENST00000628078 AGPAT3Q9NRZ7 376 aa14.39□□□□□ -0.11
TCF4-262ENST00000628078 KBTBD4Q9NVX7 518 aa14.39□□□□□ -0.11
TCF4-262ENST00000628078 CACNA1BQ00975 2339 aa14.39□□□□□ -0.11
TCF4-262ENST00000628078 NUP205Q92621 2012 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 TRIM66O15016 1216 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 KIAA0391O15091 583 aaKnown RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 FOXD2O60548 495 aaPredicted RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 PHACTR2O75167 634 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 KCNK5O95279 499 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 MBL2P11226 248 aaPredicted RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 AFMP43652 599 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 NASPP49321 788 aaPredicted RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 DHPSP49366 369 aaPredicted RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 LIMK1P53667 647 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 TNNC1P63316 161 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 KDSRQ06136 332 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 CYP24A1Q07973 514 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 TRPC3Q13507 836 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 DHCR24Q15392 516 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 MAPRE1Q15691 268 aaKnown RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 USP39Q53GS9 565 aaKnown RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 FAM26FQ5R3K3 315 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 TDRD10Q5VZ19 366 aaKnown RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 PSAPL1Q6NUJ1 521 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 SHC4Q6S5L8 630 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 TMEM92Q6UXU6 159 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 ARMCX6Q7L4S7 300 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 EPM2AIP1Q7L775 607 aaPredicted RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 ALLCQ8N6M5 410 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 SPATA18Q8TC71 538 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 SCFD1Q8WVM8 642 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 ACDQ96AP0 544 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 CGRRF1Q99675 332 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 MED10Q9BTT4 135 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 EDEM2Q9BV94 578 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 TNMDQ9H2S6 317 aa14.38□□□□□ -0.11
TCF4-262ENST00000628078 ZSCAN16Q9H4T2 348 aaPredicted RBP14.38□□□□□ -0.11
TCF4-262ENST00000628078 BCLAF3A2AJT9 711 aaKnown RBP14.37□□□□□ -0.11
TCF4-262ENST00000628078 POLR2DO15514 142 aaKnown RBP14.37□□□□□ -0.11
TCF4-262ENST00000628078 AKAP3O75969 853 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 KLF8O95600 359 aaPredicted RBP14.37□□□□□ -0.11
TCF4-262ENST00000628078 ORC1Q13415 861 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 PSMD6Q15008 389 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 RHBDF2Q6PJF5 856 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 SCARA5Q6ZMJ2 495 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 GRAMD1CQ8IYS0 662 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 DEFB119Q8N690 84 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 XXYLT1Q8NBI6 393 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 TXNDC5Q8NBS9 432 aaKnown RBP14.37□□□□□ -0.11
TCF4-262ENST00000628078 MDGA1Q8NFP4 955 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 SCAMP5Q8TAC9 235 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 DDX1Q92499 740 aaKnown RBP14.37□□□□□ -0.11
TCF4-262ENST00000628078 PIGKQ92643 395 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 WBP2Q969T9 261 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 C8orf48Q96LL4 319 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 LSM14BQ9BX40 385 aaKnown RBP14.37□□□□□ -0.11
TCF4-262ENST00000628078 LRRC27Q9C0I9 530 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 GZF1Q9H116 711 aaPredicted RBP14.37□□□□□ -0.11
TCF4-262ENST00000628078 SMYD3Q9H7B4 428 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 KIAA1586Q9HCI6 787 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.37□□□□□ -0.11
TCF4-262ENST00000628078 EBF1Q9UH73 591 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 RALYQ9UKM9 306 aaKnown RBP14.37□□□□□ -0.11
TCF4-262ENST00000628078 ANGPTL2Q9UKU9 493 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 PCDHGA5Q9Y5G8 931 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 ACACBO00763 2458 aa14.37□□□□□ -0.11
TCF4-262ENST00000628078 MAP1BP46821 2468 aaKnown RBP14.36□□□□□ -0.11
TCF4-262ENST00000628078 CNOT1A5YKK6 2376 aaKnown RBP14.36□□□□□ -0.11
TCF4-262ENST00000628078 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 SGK1O00141 431 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 IRF1P10914 325 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 SPINK2P20155 84 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 YWHAQP27348 245 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 NOP14P78316 857 aaKnown RBP14.36□□□□□ -0.11
TCF4-262ENST00000628078 SLC7A9P82251 487 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 AMPD3Q01432 767 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 CUL4BQ13620 913 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 CRY1Q16526 586 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 UAP1L1Q3KQV9 507 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 TMEFF1Q8IYR6 380 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 PGBD3Q8N328 593 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 IQUBQ8NA54 791 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 B3GALNT2Q8NCR0 500 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 PLEKHO2Q8TD55 490 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 FBXO32Q969P5 355 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 PNKPQ96T60 521 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 C7orf25Q9BPX7 421 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 TTLL2Q9BWV7 592 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 MMP17Q9ULZ9 603 aa14.36□□□□□ -0.11
TCF4-262ENST00000628078 MYH10P35580 1976 aa14.35□□□□□ -0.11
TCF4-262ENST00000628078 KMT2BQ9UMN6 2715 aaPredicted RBP14.35□□□□□ -0.11
TCF4-262ENST00000628078 LNP1A1A4G5 178 aa14.35□□□□□ -0.11
TCF4-262ENST00000628078 TRIM24O15164 1050 aa14.35□□□□□ -0.11
TCF4-262ENST00000628078 EIF3DO15371 548 aaKnown RBP eCLIP14.35□□□□□ -0.11
TCF4-262ENST00000628078 MAP3K13O43283 966 aa14.35□□□□□ -0.11
TCF4-262ENST00000628078 COCHO43405 550 aa14.35□□□□□ -0.11
TCF4-262ENST00000628078 EXOC3O60645 756 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms