RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CTSHP09668 335 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 PRKAR2AP13861 404 aaKnown RBP23.11■■□□□ 1.29
PNKP-220ENST00000627232 ADORA2BP29275 332 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 PTPN9P43378 593 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 RAB27AP51159 221 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 ARSEP51690 589 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 PDK2Q15119 407 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 ZNF618Q5T7W0 954 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 HIBCHQ6NVY1 386 aaPredicted RBP23.11■■□□□ 1.29
PNKP-220ENST00000627232 SLC26A9Q7LBE3 791 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 VSIG1Q86XK7 387 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 RELL1Q8IUW5 271 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 HSPH1Q92598 858 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 ZFP42Q96MM3 310 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 TBCBQ99426 244 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 HNRNPABQ99729 332 aaKnown RBP23.11■■□□□ 1.29
PNKP-220ENST00000627232 LPIN3Q9BQK8 851 aa23.11■■□□□ 1.29
PNKP-220ENST00000627232 THSD7BQ9C0I4 1608 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 CYB561D2O14569 222 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 DNALI1O14645 258 aaPredicted RBP23.1■■□□□ 1.29
PNKP-220ENST00000627232 GABRDO14764 452 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 THP07101 528 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 PTGISQ16647 500 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 C15orf59Q2T9L4 293 aaPredicted RBP23.1■■□□□ 1.29
PNKP-220ENST00000627232 CCDC25Q86WR0 208 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 RFX6Q8HWS3 928 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 B3GALNT2Q8NCR0 500 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 GSTCDQ8NEC7 633 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 ACTL9Q8TC94 416 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 CENPHQ9H3R5 247 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 PCDH9Q9HC56 1237 aa23.1■■□□□ 1.29
PNKP-220ENST00000627232 APOC4-APOC2K7ER74 178 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 XPO1O14980 1071 aaKnown RBP23.09■■□□□ 1.29
PNKP-220ENST00000627232 ZNF623O75123 536 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 GRAP2O75791 330 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 APOC2P02655 101 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 VPS41P49754 854 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 OTUD4Q01804 1114 aaKnown RBP23.09■■□□□ 1.29
PNKP-220ENST00000627232 TFDP2Q14188 446 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 P3H1Q32P28 736 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 SH3PXD2AQ5TCZ1 1133 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 MAP7D3Q8IWC1 876 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 SCUBE3Q8IX30 993 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 TMEM86AQ8N2M4 240 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 SLC2A14Q8TDB8 520 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 TLCD1Q96CP7 247 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 PGM2Q96G03 612 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 GAD1Q99259 594 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 ROPN1BQ9BZX4 212 aaPredicted RBP23.09■■□□□ 1.29
PNKP-220ENST00000627232 CDC42EP4Q9H3Q1 356 aaKnown RBP23.09■■□□□ 1.29
PNKP-220ENST00000627232 ROPN1Q9HAT0 212 aaPredicted RBP23.09■■□□□ 1.29
PNKP-220ENST00000627232 GRIN2DO15399 1336 aa23.09■■□□□ 1.29
PNKP-220ENST00000627232 KIF3CO14782 793 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 CABYRO75952 493 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 SHBGP04278 402 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 CD48P09326 243 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 RPL9P32969 192 aaKnown RBP23.08■■□□□ 1.29
PNKP-220ENST00000627232 CHKAP35790 457 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 THPOP40225 353 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 MLH1P40692 756 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 PTK7Q13308 1070 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 TAF5Q15542 800 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 FAM26DQ5JW98 314 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 C6orf118Q5T5N4 469 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 HAUS1Q96CS2 278 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 CFAP57Q96MR6 1250 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 AGO3Q9H9G7 860 aaKnown RBP23.08■■□□□ 1.29
PNKP-220ENST00000627232 GPBP1L1Q9HC44 474 aaPredicted RBP23.08■■□□□ 1.29
PNKP-220ENST00000627232 RNF186Q9NXI6 227 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 SRCAPQ6ZRS2 3230 aa23.08■■□□□ 1.29
PNKP-220ENST00000627232 ERICH4A6NGS2 130 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 MEIS3P2A8K0S8 358 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 ZNF487B1APH4 448 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 PTPN1P18031 435 aaKnown RBP23.08■■□□□ 1.28
PNKP-220ENST00000627232 HOXD10P28358 340 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 IRAK1P51617 712 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 CDH6P55285 790 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 SLC8A3P57103 927 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 PLCB3Q01970 1234 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 DSC3Q14574 896 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 AGMOQ6ZNB7 445 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 ZCCHC9Q8N567 271 aaKnown RBP23.08■■□□□ 1.28
PNKP-220ENST00000627232 FAM172AQ8WUF8 416 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 SENP8Q96LD8 212 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 C11orf84Q9BUA3 381 aaPredicted RBP23.08■■□□□ 1.28
PNKP-220ENST00000627232 CFHR5Q9BXR6 569 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 CALN1Q9BXU9 219 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 MAK16Q9BXY0 300 aaKnown RBP23.08■■□□□ 1.28
PNKP-220ENST00000627232 DUSP16Q9BY84 665 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 ADAM7Q9H2U9 754 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.08■■□□□ 1.28
PNKP-220ENST00000627232 TPX2Q9ULW0 747 aaKnown RBP23.08■■□□□ 1.28
PNKP-220ENST00000627232 SQORQ9Y6N5 450 aa23.08■■□□□ 1.28
PNKP-220ENST00000627232 ARL5CA6NH57 179 aa23.07■■□□□ 1.28
PNKP-220ENST00000627232 SGK1O00141 431 aa23.07■■□□□ 1.28
PNKP-220ENST00000627232 MDM4O15151 490 aa23.07■■□□□ 1.28
PNKP-220ENST00000627232 TTC4O95801 387 aa23.07■■□□□ 1.28
PNKP-220ENST00000627232 ELNP15502 786 aa23.07■■□□□ 1.28
PNKP-220ENST00000627232 LHX1P48742 406 aa23.07■■□□□ 1.28
PNKP-220ENST00000627232 DYNLT1P63172 113 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms