RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ZNF782Q6ZMW2 699 aaPredicted RBP4.1□□□□□ -1.75
VBP1-204ENST00000625964 MAVSQ7Z434 540 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 SLC15A3Q8IY34 581 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 ATG4AQ8WYN0 398 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 HAPLN3Q96S86 360 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 MESP1Q9BRJ9 268 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 TMEM79Q9BSE2 394 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 CXorf36Q9H7Y0 433 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 ZNF287Q9HBT7 754 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 CHPF2Q9P2E5 772 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 AFF4Q9UHB7 1163 aaKnown RBP4.1□□□□□ -1.75
VBP1-204ENST00000625964 ZNF112Q9UJU3 913 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 ADAM21Q9UKJ8 722 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 PAXBP1Q9Y5B6 917 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 PCDHGB6Q9Y5F9 930 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 SLC16A3O15427 465 aaKnown RBP4.09□□□□□ -1.75
VBP1-204ENST00000625964 HRGP04196 525 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 RHCEP18577 417 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 EPHB2P29323 1055 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 NR4A2P43354 598 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 PRKAG1P54619 331 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 RHDQ02161 417 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 BMPR2Q13873 1038 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 GALEQ14376 348 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 ZIK1Q3SY52 487 aaPredicted RBP4.09□□□□□ -1.75
VBP1-204ENST00000625964 C3orf38Q5JPI3 329 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 TREML2Q5T2D2 321 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 DEPDC1Q5TB30 811 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 ZNF551Q7Z340 670 aaPredicted RBP4.09□□□□□ -1.75
VBP1-204ENST00000625964 DTX2Q86UW9 622 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 GAS2L3Q86XJ1 694 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 KRT73Q86Y46 540 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 RASAL3Q86YV0 1011 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 OR56A3Q8NH54 315 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 GLOD4Q9HC38 313 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 A1CFQ9NQ94 594 aaKnown RBP4.09□□□□□ -1.75
VBP1-204ENST00000625964 ARHGEF3Q9NR81 526 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 PADI4Q9UM07 663 aa4.09□□□□□ -1.75
VBP1-204ENST00000625964 TRIM43BA6NCK2 446 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 RASSF9O75901 435 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 FESP07332 822 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 IL6RP08887 468 aaPredicted RBP4.08□□□□□ -1.76
VBP1-204ENST00000625964 MYF5P13349 255 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 NDUFB7P17568 137 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 KCNA3P22001 575 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 LIPAP38571 399 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 ALDH9A1P49189 494 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 CCT8P50990 548 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 PDE6CP51160 858 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 PLCD1P51178 756 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 DGKEP52429 567 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 FMO1Q01740 532 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 DLK2Q6UY11 383 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 YTHDF3Q7Z739 585 aaKnown RBP4.08□□□□□ -1.76
VBP1-204ENST00000625964 MICU3Q86XE3 530 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 DGKHQ86XP1 1220 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 BPIFB1Q8TDL5 484 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 GLG1Q92896 1179 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 SPSB4Q96A44 273 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 TRIM43Q96BQ3 446 aaPredicted RBP4.08□□□□□ -1.76
VBP1-204ENST00000625964 R3HDM4Q96D70 268 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 APIPQ96GX9 242 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 STK31Q9BXU1 1019 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 ELOVL5Q9NYP7 299 aa4.08□□□□□ -1.76
VBP1-204ENST00000625964 A1L4Q6 167 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 MBD3L4A6NDZ8 208 aaPredicted RBP4.07□□□□□ -1.76
VBP1-204ENST00000625964 MBD3L3A6NE82 208 aaPredicted RBP4.07□□□□□ -1.76
VBP1-204ENST00000625964 PYCARD-AS1I3L0S3 204 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 CSF1RP07333 972 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 DRD4P21917 467 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 KLRC1P26715 233 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 PCSK6P29122 969 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 ADORA2AP29274 412 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 PDE1AP54750 535 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 RPS16P62249 146 aaKnown RBP4.07□□□□□ -1.76
VBP1-204ENST00000625964 SEMA5AQ13591 1074 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 CACHD1Q5VU97 1274 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 LRRC71Q8N4P6 559 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 ADAMTS15Q8TE58 950 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 TMEM171Q8WVE6 324 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 OSCP1Q8WVF1 389 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 TTC17Q96AE7 1141 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 PPP1R9BQ96SB3 815 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 APOL5Q9BWW9 433 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 EBF3Q9H4W6 596 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 SERTAD4Q9NUC0 356 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 TRMT13Q9NUP7 481 aaKnown RBP4.07□□□□□ -1.76
VBP1-204ENST00000625964 CCNL1Q9UK58 526 aaPredicted RBP4.07□□□□□ -1.76
VBP1-204ENST00000625964 HDAC9Q9UKV0 1011 aa4.07□□□□□ -1.76
VBP1-204ENST00000625964 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 MYMKA6NI61 221 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 CYSRT1A8MQ03 144 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 QSOX1O00391 747 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 JUPP14923 745 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 CYB5RLQ6IPT4 315 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 ZDHHC24Q6UX98 284 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 SESTD1Q86VW0 696 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 SPARTQ8N0X7 666 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 XAGE5Q8WWM1 108 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 PPP2R3CQ969Q6 453 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms