RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SUPT3HO75486 399 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 MAPTP10636 758 aaKnown RBP16.74■□□□□ 0.27
GABRB3-215ENST00000622697 IRF1P10914 325 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 DGKZQ13574 1117 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 PBXIP1Q96AQ6 731 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 RXFP1Q9HBX9 757 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 TRPC7Q9HCX4 862 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 TRAPPC3O43617 180 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 YY1P25490 414 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 CDC42EP1Q00587 391 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 SLC26A11Q86WA9 606 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 TEX9Q8N6V9 391 aa16.74■□□□□ 0.27
GABRB3-215ENST00000622697 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.74■□□□□ 0.27
GABRB3-215ENST00000622697 SDR42E2A6NKP2 422 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ZBTB24O43167 697 aaPredicted RBP16.73■□□□□ 0.27
GABRB3-215ENST00000622697 NDUFS3O75489 264 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ZCCHC18P0CG32 403 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 PRKCIP41743 596 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 RASA2Q15283 850 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ATP13A4Q4VNC1 1196 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ANKRD13AQ8IZ07 590 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 TTC30BQ8N4P2 665 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 IARS2Q9NSE4 1012 aaKnown RBP16.73■□□□□ 0.27
GABRB3-215ENST00000622697 UBQLN1Q9UMX0 589 aaKnown RBP16.73■□□□□ 0.27
GABRB3-215ENST00000622697 SKOR1P84550 965 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 SPDYAQ5MJ70 313 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ADNPQ9H2P0 1102 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 GAS2O43903 313 aaKnown RBP16.73■□□□□ 0.27
GABRB3-215ENST00000622697 LSM8O95777 96 aaKnown RBP16.73■□□□□ 0.27
GABRB3-215ENST00000622697 SPATA31C1P0DKV0 1188 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ATP6V1B1P15313 513 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 GCNT1Q02742 428 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ARHGAP10A1A4S6 786 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 PDK2Q15119 407 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 MGAT5BQ3V5L5 792 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 SLFN11Q7Z7L1 901 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 HASPINQ8TF76 798 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 PCDH9Q9HC56 1237 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ABI2Q9NYB9 513 aaPredicted RBP16.73■□□□□ 0.27
GABRB3-215ENST00000622697 TSPAN16Q9UKR8 245 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 OR1G1P47890 313 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 NDST1P52848 882 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 MAP3K7CLP57077 242 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 NAPEPLDQ6IQ20 393 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 ZBED2Q9BTP6 218 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 CYP4F12Q9HCS2 524 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
GABRB3-215ENST00000622697 E9PBE3 544 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 O00370 1275 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 PSMD3O43242 534 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 TPST1O60507 370 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 KLHL41O60662 606 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 PCSK1P29120 753 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 FDFT1P37268 417 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 FLOT2Q14254 428 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 GNASQ5JWF2 1037 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 SHCBP1Q8NEM2 672 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 GANCQ8TET4 914 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 CYGBQ8WWM9 190 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 CHST12Q9NRB3 414 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 KIF17Q9P2E2 1029 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 RUVBL2Q9Y230 463 aaKnown RBP16.72■□□□□ 0.27
GABRB3-215ENST00000622697 PRG3Q9Y2Y8 225 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-215ENST00000622697 CYP3A4P08684 503 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 CYP2F1P24903 491 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 HMOX2P30519 316 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 ITGB3BPQ13352 177 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-215ENST00000622697 KRT33BQ14525 404 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 IRF2BP2Q7Z5L9 587 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 MAP4K3Q8IVH8 894 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 SCUBE3Q8IX30 993 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 KAT2BQ92831 832 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 BHMTQ93088 406 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 WNK4Q96J92 1243 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 ATRNO75882 1429 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 NME5P56597 212 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 TSPAN17Q96FV3 270 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 SLC24A2Q9UI40 661 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 KBTBD13C9JR72 458 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 AP3B1O00203 1094 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 GLRA3O75311 464 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 UPP2O95045 317 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 CBX6O95503 412 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 GRAMD4Q6IC98 578 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 KIAA1683Q9H0B3 1180 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 SNTG2Q9NY99 539 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 XPO1O14980 1071 aaKnown RBP16.72■□□□□ 0.27
GABRB3-215ENST00000622697 CES3Q6UWW8 571 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 STRA8Q7Z7C7 330 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 ARHGAP18Q8N392 663 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 OSMRQ99650 979 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 FRMD8Q9BZ67 464 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-215ENST00000622697 ILKAPQ9H0C8 392 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-215ENST00000622697 CATSPERBQ9H7T0 1116 aa16.72■□□□□ 0.27
GABRB3-215ENST00000622697 TIMM13Q9Y5L4 95 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-215ENST00000622697 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
GABRB3-215ENST00000622697 SRP72O76094 671 aaKnown RBP16.71■□□□□ 0.27
GABRB3-215ENST00000622697 DSG3P32926 999 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms