RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ITIH2P19823 946 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 GTF2A1P52655 376 aaPredicted RBP9.6□□□□□ -0.87
GGA3-223ENST00000621870 OXCT1P55809 520 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 PRKCZQ05513 592 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 CRHR2Q13324 411 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 KCNA10Q16322 511 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 PPM1LQ5SGD2 360 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 FIBCD1Q8N539 461 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 BRI3BPQ8WY22 251 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 KRT35Q92764 455 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 UBP1Q9NZI7 540 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 APOBEC2Q9Y235 224 aaKnown RBP9.6□□□□□ -0.87
GGA3-223ENST00000621870 AP3B1O00203 1094 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 PLA2G6O60733 806 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 SNHG28P0DPA3 235 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 CCDC130P13994 396 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 TNFSF9P41273 254 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 SCNN1BP51168 640 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 GCNT1Q02742 428 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 DDIASQ8IXT1 998 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 FAM136AQ96C01 138 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 SMARCD1Q96GM5 515 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 ZSWIM1Q9BR11 485 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 ELOVL4Q9GZR5 314 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 ZCCHC17Q9NP64 241 aaKnown RBP9.6□□□□□ -0.87
GGA3-223ENST00000621870 CASS4Q9NQ75 786 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 MRPL17Q9NRX2 175 aaKnown RBP9.6□□□□□ -0.87
GGA3-223ENST00000621870 PSMD3O43242 534 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 RAD51CO43502 376 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 XYLBO75191 536 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 POLBP06746 335 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 FGRP09769 529 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
GGA3-223ENST00000621870 STIP1P31948 543 aaKnown RBP9.6□□□□□ -0.87
GGA3-223ENST00000621870 TBX4P57082 545 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 RHOAP61586 193 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 DLG4P78352 724 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 OTUD4Q01804 1114 aaKnown RBP9.6□□□□□ -0.87
GGA3-223ENST00000621870 PLD1Q13393 1074 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 E2F4Q16254 413 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 DEFB106AQ8N104 65 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 C4orf33Q8N1A6 199 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 ACTL9Q8TC94 416 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 DNAJC19Q96DA6 116 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 ZBTB10Q96DT7 871 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 ERLEC1Q96DZ1 483 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 MAML3Q96JK9 1138 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 ULBP1Q9BZM6 244 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 TMEM134Q9H6X4 195 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 RPS6KL1Q9Y6S9 549 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 MORC2Q9Y6X9 1032 aaPredicted RBP9.6□□□□□ -0.87
GGA3-223ENST00000621870 SLIT3O75094 1523 aa9.6□□□□□ -0.87
GGA3-223ENST00000621870 SMIM24O75264 130 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 DUSP11O75319 330 aaKnown RBP9.59□□□□□ -0.87
GGA3-223ENST00000621870 GJB6O95452 261 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 ANP32DO95626 131 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 SPATA31C1P0DKV0 1188 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 ARL4DP49703 201 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 CRYBB1P53674 252 aaPredicted RBP9.59□□□□□ -0.87
GGA3-223ENST00000621870 MORF4L2Q15014 288 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 LMNTD2Q8IXW0 634 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 NOA1Q8NC60 698 aaKnown RBP9.59□□□□□ -0.87
GGA3-223ENST00000621870 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 GPR20Q99678 358 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 NXF3Q9H4D5 531 aaKnown RBP9.59□□□□□ -0.87
GGA3-223ENST00000621870 SMYD3Q9H7B4 428 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 SLC28A3Q9HAS3 691 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 FAM105AQ9NUU6 356 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 EPS15L1Q9UBC2 864 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 SLIT2O94813 1529 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 TLL1O43897 1013 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 SYNCRIPO60506 623 aaKnown RBP9.59□□□□□ -0.87
GGA3-223ENST00000621870 RNASEH1O60930 286 aaKnown RBP9.59□□□□□ -0.87
GGA3-223ENST00000621870 CDH16O75309 829 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 ANXA9O76027 345 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 PROSCO94903 275 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 LSM8O95777 96 aaKnown RBP9.59□□□□□ -0.87
GGA3-223ENST00000621870 CALCAP01258 141 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 USP17L7P0C7H9 530 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 CKBP12277 381 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 CARSP49589 748 aaKnown RBP9.59□□□□□ -0.87
GGA3-223ENST00000621870 STAT4Q14765 748 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 ACAD11Q709F0 780 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 NT5DC4Q86YG4 428 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 RAB42Q8N4Z0 105 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 USP38Q8NB14 1042 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 PDZD8Q8NEN9 1154 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 OR5B17Q8NGF7 314 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 PPTC7Q8NI37 304 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 KAT2BQ92831 832 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 DNAJC7Q99615 494 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 CENPKQ9BS16 269 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 ERP44Q9BS26 406 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 CEP41Q9BYV8 373 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 NT5MQ9NPB1 228 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 COL20A1Q9P218 1284 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 TMEM247A6NEH6 219 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 E5RJQ4 531 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 KIF3CO14782 793 aa9.59□□□□□ -0.87
GGA3-223ENST00000621870 AOC2O75106 756 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms