RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 C15orf59Q2T9L4 293 aaPredicted RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 SMTNL2Q2TAL5 461 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 OVOS1Q6IE37 1185 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 TTC27Q6P3X3 843 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 MFSD7Q6UXD7 560 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 CLEC20AQ6ZU45 233 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 SLC26A9Q7LBE3 791 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 CCDC105Q8IYK2 499 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 C12orf50Q8NA57 414 aaPredicted RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 C1orf54Q8WWF1 131 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 ZNF333Q96JL9 665 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 CFAP57Q96MR6 1250 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 RTP3Q9BQQ7 232 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 ACBD6Q9BR61 282 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 TRIM51Q9BSJ1 452 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 RAB17Q9H0T7 212 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 LRRC4Q9HBW1 653 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 PCDHB8Q9UN66 801 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 BEST1O76090 585 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 IL1R2P27930 398 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 PCK1P35558 622 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 FNTAP49354 379 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 EPHB4P54760 987 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 TCTN1Q2MV58 587 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 CCDC14Q49A88 953 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 KAZNQ674X7 775 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 AENQ8WTP8 325 aaKnown RBP22.5■■□□□ 1.19
SPAST-204ENST00000621856 RAPGEF5Q92565 580 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 KHSRPQ92945 711 aaKnown RBP eCLIP22.5■■□□□ 1.192e-6■■□□□ 12.7
SPAST-204ENST00000621856 PCYOX1Q9UHG3 505 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 NFU1Q9UMS0 254 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 PRG3Q9Y2Y8 225 aaPredicted RBP22.5■■□□□ 1.19
SPAST-204ENST00000621856 TET1Q8NFU7 2136 aa22.5■■□□□ 1.19
SPAST-204ENST00000621856 PARNO95453 639 aaKnown RBP22.49■■□□□ 1.19
SPAST-204ENST00000621856 TRUB2O95900 331 aaKnown RBP22.49■■□□□ 1.19
SPAST-204ENST00000621856 TYMPP19971 482 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 CYP2C18P33260 490 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 ATP11AP98196 1134 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 SNX1Q13596 522 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 INTS6LQ5JSJ4 861 aaKnown RBP22.49■■□□□ 1.19
SPAST-204ENST00000621856 SH3PXD2AQ5TCZ1 1133 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 FBXO46Q6PJ61 603 aaPredicted RBP22.49■■□□□ 1.19
SPAST-204ENST00000621856 ANKS1BQ7Z6G8 1248 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 JAMLQ86YT9 394 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 KCTD13Q8WZ19 329 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 MYLPFQ96A32 169 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 TOX2Q96NM4 488 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 LRRC19Q9H756 370 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 NGRNQ9NPE2 291 aaKnown RBP22.49■■□□□ 1.19
SPAST-204ENST00000621856 DNAJB4Q9UDY4 337 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 USP18Q9UMW8 372 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 BRCA2P51587 3418 aa22.49■■□□□ 1.19
SPAST-204ENST00000621856 TMEM189-UBE2V1I3L0A0 370 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 SASH3O75995 380 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 KRT10P13645 584 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 PTGIRP43119 386 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 KLF1Q13351 362 aaPredicted RBP22.48■■□□□ 1.19
SPAST-204ENST00000621856 CUL1Q13616 776 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 HLTFQ14527 1009 aaKnown RBP eCLIP22.48■■□□□ 1.19
SPAST-204ENST00000621856 KCNT1Q5JUK3 1230 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 EFHC1Q5JVL4 640 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 DEFB128Q7Z7B8 93 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 SIX6OS1Q8N1H7 587 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 DIS3LQ8TF46 1054 aaKnown RBP22.48■■□□□ 1.19
SPAST-204ENST00000621856 SMARCD1Q96GM5 515 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 GDAP1L1Q96MZ0 367 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 DCLK3Q9C098 648 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 ATP11BQ9Y2G3 1177 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 PRPSAP2O60256 369 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 TJP3O95049 919 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 GATMP50440 423 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 TSPY1Q01534 308 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 CASP8Q14790 479 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 TRADDQ15628 312 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 KCTD19Q17RG1 926 aaPredicted RBP22.48■■□□□ 1.19
SPAST-204ENST00000621856 TFDP3Q5H9I0 405 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 SND1Q7KZF4 910 aaKnown RBP eCLIP22.48■■□□□ 1.19
SPAST-204ENST00000621856 FAM172AQ8WUF8 416 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 ATG4AQ8WYN0 398 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 HSPH1Q92598 858 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 CASD1Q96PB1 797 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 SMOQ99835 787 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 DPH5Q9H2P9 285 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 CHST7Q9NS84 486 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 HOMER3Q9NSC5 361 aa22.48■■□□□ 1.19
SPAST-204ENST00000621856 BHMG1C9JSJ3 638 aaPredicted RBP22.47■■□□□ 1.19
SPAST-204ENST00000621856 DAPK3O43293 454 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 HOXA2O43364 376 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 TADA2AO75478 443 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 CXCL10P02778 98 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 PTPN7P35236 360 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 KCNJ1P48048 391 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 YWHAHQ04917 246 aaPredicted RBP22.47■■□□□ 1.19
SPAST-204ENST00000621856 SCYL2Q6P3W7 929 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 FAM171BQ6P995 826 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 EMBQ6PCB8 327 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 DDX42Q86XP3 938 aaKnown RBP eCLIP22.47■■□□□ 1.19
SPAST-204ENST00000621856 KCTD6Q8NC69 237 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 NCAPGQ9BPX3 1015 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 ERP44Q9BS26 406 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms