RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 CDH8P55286 799 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ARL4CP56559 192 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 PSMC1P62191 440 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 YWHAEP62258 255 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 MRPS5P82675 430 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 TFAMQ00059 246 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 IL9RQ01113 521 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 RNASELQ05823 741 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 POU5F1BQ06416 359 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ARHGAP1Q07960 439 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 MYO1EQ12965 1108 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 MMRN1Q13201 1228 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ORC1Q13415 861 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 NEDD9Q14511 834 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SPARCL1Q14515 664 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 MXD4Q14582 209 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 ACAP1Q15027 740 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 PRKD1Q15139 912 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 CA9Q16790 459 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 LY6KQ17RY6 165 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 DUOXA2Q1HG44 320 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SGSM1Q2NKQ1 1148 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 C15orf59Q2T9L4 293 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 HSDL1Q3SXM5 330 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ZNF394Q53GI3 561 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 TEX44Q53QW1 395 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SLC45A4Q5BKX6 768 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ZNF667Q5HYK9 610 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 KCNT1Q5JUK3 1230 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 HP1BP3Q5SSJ5 553 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 CELF3Q5SZQ8 465 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 FAM182AQ5T1J6 154 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SH3PXD2AQ5TCZ1 1133 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ATF7IP2Q5U623 682 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 OTUD1Q5VV17 481 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 MAP1SQ66K74 1059 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 STEAP4Q687X5 459 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SLC9A4Q6AI14 798 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 JADE1Q6IE81 842 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 DCUN1D2Q6PH85 259 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 LVRNQ6Q4G3 990 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 OLFML1Q6UWY5 402 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CAPN12Q6ZSI9 719 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 FAM183BPQ6ZVS7 135 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CENPUQ71F23 418 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ILDR2Q71H61 639 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 NLRP9Q7RTR0 991 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CCDC91Q7Z6B0 441 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 PRPF39Q86UA1 669 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 CAND1Q86VP6 1230 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 TTC30AQ86WT1 665 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CDR2LQ86X02 465 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 VSIG1Q86XK7 387 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CCDC125Q86Z20 511 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 RHPN2Q8IUC4 686 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 FBXO16Q8IX29 292 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 THNSL1Q8IYQ7 743 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ZBED8Q8IZ13 594 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ANKRD35Q8N283 1001 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 C7orf31Q8N865 590 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.38□□□□□ -1.87
U1.39-201ENST00000621562 ENDOVQ8N8Q3 282 aaKnown RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 RNF149Q8NC42 400 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 FAM13CQ8NE31 585 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 FBXO36Q8NEA4 188 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 RFWD2Q8NHY2 731 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 FBF1Q8TES7 1133 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 DYDC1Q8WWB3 177 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SLC44A1Q8WWI5 657 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SEPT1Q8WYJ6 367 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 JDP2Q8WYK2 163 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ZNF75CPQ92670 426 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 COPS5Q92905 334 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 KLHL29Q96CT2 875 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 APOPT1Q96IL0 206 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ANKRD36BP1Q96IX9 119 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SERAC1Q96JX3 654 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 TMEM237Q96Q45 408 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 MYCBPQ99417 103 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 CCDC77Q9BR77 488 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CNPY3Q9BT09 278 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 C2orf40Q9H1Z8 148 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CXCL16Q9H2A7 254 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CXorf56Q9H5V9 222 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 FAM124BQ9H5Z6 455 aaPredicted RBP3.38□□□□□ -1.87
U1.39-201ENST00000621562 ZWILCHQ9H900 591 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 VPS37BQ9H9H4 285 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 CYP3A43Q9HB55 503 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 PCDH18Q9HCL0 1135 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 TXNRD2Q9NNW7 524 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SAR1AQ9NR31 198 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SMYD2Q9NRG4 433 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 NRBP2Q9NSY0 501 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 TXLNGQ9NUQ3 528 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 ARL8BQ9NVJ2 186 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 GPATCH2LQ9NWQ4 482 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 MTMR10Q9NXD2 777 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 HOXC10Q9NYD6 342 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 WDR35Q9P2L0 1181 aa3.38□□□□□ -1.87
U1.39-201ENST00000621562 SLC17A7Q9P2U7 560 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms