RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 GRIK1P39086 918 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 SLC6A3Q01959 620 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 SMTNL2Q2TAL5 461 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 KCNT1Q5JUK3 1230 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 PPP1R2P3Q6NXS1 205 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 HFE2Q6ZVN8 426 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 ADAM33Q9BZ11 813 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 DNAI2Q9GZS0 605 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 CRISPLD1Q9H336 500 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 LRRC4Q9HBW1 653 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 PDGFRAP16234 1089 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 TCP1P17987 556 aaKnown RBP16.72■□□□□ 0.27
CBWD3-216ENST00000621396 PEX5P50542 639 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 MRPL58Q14197 206 aaKnown RBP16.72■□□□□ 0.27
CBWD3-216ENST00000621396 RNF19BQ6ZMZ0 732 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 MYRIPQ8NFW9 859 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 RXFP2Q8WXD0 754 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 ULBP1Q9BZM6 244 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 ZCWPW1Q9H0M4 648 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 PLEKHA4Q9H4M7 779 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 PCSK1NQ9UHG2 260 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 TMEM59LQ9UK28 342 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 PTPRSQ13332 1948 aa16.72■□□□□ 0.27
CBWD3-216ENST00000621396 PYGMP11217 842 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 MYOGP15173 224 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 ATXN1P54253 815 aaKnown RBP16.71■□□□□ 0.27
CBWD3-216ENST00000621396 C2orf54Q08AI8 447 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 KIAA1841Q6NSI8 718 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 CC2D1AQ6P1N0 951 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-216ENST00000621396 NOA1Q8NC60 698 aaKnown RBP16.71■□□□□ 0.27
CBWD3-216ENST00000621396 STK32AQ8WU08 396 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 TMEM169Q96HH4 297 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 ZNF558Q96NG5 402 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 WDR35Q9P2L0 1181 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 IP6K2Q9UHH9 426 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 TNRC18O15417 2968 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-216ENST00000621396 GRXCR1A8MXD5 290 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 HHLA1C9JL84 531 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 ADCY1Q08828 1119 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 ERCC6LQ2NKX8 1250 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 ZFYVE27Q5T4F4 411 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 CCDC181Q5TID7 509 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 FAM109BQ6ICB4 259 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-216ENST00000621396 ZNF280DQ6N043 979 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 SIX6OS1Q8N1H7 587 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 COLGALT1Q8NBJ5 622 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-216ENST00000621396 ABHD8Q96I13 439 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 AP1M1Q9BXS5 423 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 MTUS1Q9ULD2 1270 aa16.71■□□□□ 0.27
CBWD3-216ENST00000621396 ARHGEF37A1IGU5 675 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 YJEFN3A6XGL0 299 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 E7ENQ6 273 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 EFCAB14O75071 495 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 PRLRP16471 622 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 PGFP49763 221 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 PITX1P78337 314 aaPredicted RBP16.7■□□□□ 0.26
CBWD3-216ENST00000621396 C9orf50Q5SZB4 431 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 HSFY1Q96LI6 401 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 ZWILCHQ9H900 591 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 CALCOCO1Q9P1Z2 691 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 SPTBN5Q9NRC6 3674 aaKnown RBP16.7■□□□□ 0.26
CBWD3-216ENST00000621396 SYNJ2BP-COX16A0A087WUM0 186 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 C2CD4BA6NLJ0 364 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 PI4K2BG5E9Z4 385 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 LRCH4O75427 683 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 IL1R2P27930 398 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 OR1D2P34982 312 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 CA8P35219 290 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 CTNNA1P35221 906 aaKnown RBP16.7■□□□□ 0.26
CBWD3-216ENST00000621396 USP41Q3LFD5 358 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 CCDC14Q49A88 953 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 TEX35Q5T0J7 233 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 ANKS1BQ7Z6G8 1248 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 SLC39A11Q8N1S5 342 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 COX16Q9P0S2 106 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 NR2E1Q9Y466 385 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 PCDHA3Q9Y5H8 950 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 SLC4A7Q9Y6M7 1214 aa16.7■□□□□ 0.26
CBWD3-216ENST00000621396 VNN2O95498 520 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 CAPN2P17655 700 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 PAX3P23760 479 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 RPL34P49207 117 aaKnown RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 DUSP4Q13115 394 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 WHAMMP3Q1A5X7 153 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 SMYD5Q6GMV2 418 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 UBL4BQ8N7F7 174 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 FBXO22Q8NEZ5 403 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 ADAM32Q8TC27 787 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 EDEM1Q92611 657 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 RNPC3Q96LT9 517 aaKnown RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 CSNK1G1Q9HCP0 422 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 NGRNQ9NPE2 291 aaKnown RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 DMAP1Q9NPF5 467 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 MYO7AQ13402 2215 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 TCRBV7S2A1N4TA0A589 114 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 TLL1O43897 1013 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms