RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 FKBP15Q5T1M5 1219 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 TRIM68Q6AZZ1 485 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 CC2D1AQ6P1N0 951 aaPredicted RBP17.14■□□□□ 0.33
CD40-207ENST00000620709 C1orf228Q6PIY5 440 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 TRAPPC11Q7Z392 1133 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 RALGPS2Q86X27 583 aaPredicted RBP17.14■□□□□ 0.33
CD40-207ENST00000620709 SLC9A9Q8IVB4 645 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 C12orf56Q8IXR9 622 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 XXYLT1Q8NBI6 393 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 METTL14Q9HCE5 456 aaKnown RBP17.14■□□□□ 0.33
CD40-207ENST00000620709 ABCB6Q9NP58 842 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 UXTQ9UBK9 157 aaPredicted RBP17.14■□□□□ 0.33
CD40-207ENST00000620709 SMG5Q9UPR3 1016 aaKnown RBP17.14■□□□□ 0.33
CD40-207ENST00000620709 DMXL1Q9Y485 3027 aa17.14■□□□□ 0.33
CD40-207ENST00000620709 A0A1W2PQC6 194 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 WEE1P30291 646 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 GRIK1P39086 918 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 NRLP54845 237 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 MLLT6P55198 1093 aaPredicted RBP17.13■□□□□ 0.33
CD40-207ENST00000620709 LPAL2Q16609 132 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 CEP135Q66GS9 1140 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 C4orf50Q6ZRC1 276 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 Q6ZS52 159 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 TRIM59Q8IWR1 403 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 ZBTB44Q8NCP5 570 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 SPATA18Q8TC71 538 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 TMEM174Q8WUU8 243 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 KBTBD7Q8WVZ9 684 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 USP13Q92995 863 aaPredicted RBP17.13■□□□□ 0.33
CD40-207ENST00000620709 SECISBP2LQ93073 1101 aaKnown RBP17.13■□□□□ 0.33
CD40-207ENST00000620709 MYLPFQ96A32 169 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 PKMYT1Q99640 499 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 IER2Q9BTL4 223 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 SNX25Q9H3E2 840 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 NDST4Q9H3R1 872 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 EBF3Q9H4W6 596 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 TDP1Q9NUW8 608 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 DMAC2Q9NW81 257 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 ARMCX3Q9UH62 379 aaPredicted RBP17.13■□□□□ 0.33
CD40-207ENST00000620709 ZMYM5Q9UJ78 669 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.13■□□□□ 0.33
CD40-207ENST00000620709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
CD40-207ENST00000620709 DENND4CQ5VZ89 1909 aa17.13■□□□□ 0.33
CD40-207ENST00000620709 GABRDO14764 452 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 PHACTR2O75167 634 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 NOL4O94818 638 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 CST3P01034 146 aaPredicted RBP17.12■□□□□ 0.33
CD40-207ENST00000620709 BDNFP23560 247 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 PSMC2P35998 433 aaKnown RBP17.12■□□□□ 0.33
CD40-207ENST00000620709 TNNC1P63316 161 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 CYP24A1Q07973 514 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 TBX2Q13207 712 aaPredicted RBP17.12■□□□□ 0.33
CD40-207ENST00000620709 TRPC3Q13507 836 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 TRIM14Q14142 442 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 PSMD6Q15008 389 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 DGKKQ5KSL6 1271 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 HEATR6Q6AI08 1181 aaKnown RBP17.12■□□□□ 0.33
CD40-207ENST00000620709 DPH6Q7L8W6 267 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 MON1AQ86VX9 555 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 OR6B3Q8NGW1 331 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 CGRRF1Q99675 332 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 MRPL45Q9BRJ2 306 aaKnown RBP17.12■□□□□ 0.33
CD40-207ENST00000620709 FAM126AQ9BYI3 521 aaPredicted RBP17.12■□□□□ 0.33
CD40-207ENST00000620709 CDH9Q9ULB4 789 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 FRMD4BQ9Y2L6 1034 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 ZKSCAN5Q9Y2L8 839 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.12■□□□□ 0.33
CD40-207ENST00000620709 OBSL1O75147 1896 aa17.12■□□□□ 0.33
CD40-207ENST00000620709 EXOC3O60645 756 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 AKAP3O75969 853 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 CKMP06732 381 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 TPM1P09493 284 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 WARSP23381 471 aaKnown RBP17.11■□□□□ 0.33
CD40-207ENST00000620709 ANXA13P27216 316 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 GNL1P36915 607 aaPredicted RBP17.11■□□□□ 0.33
CD40-207ENST00000620709 GAS6Q14393 721 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 CFAP221Q4G0U5 840 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 MDH1BQ5I0G3 518 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 FAM171BQ6P995 826 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 PRR23BQ6ZRT6 265 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 ZSCAN30Q86W11 494 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 SPEM1Q8N4L4 309 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 FUBP3Q96I24 572 aaKnown RBP eCLIP17.11■□□□□ 0.33
CD40-207ENST00000620709 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 CRTAC1Q9NQ79 661 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 RAB23Q9ULC3 237 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 OTOGLQ3ZCN5 2332 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 TRAV19A0A0A6YYK7 116 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 CHURC1-FNTBB4DL54 471 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 LILRB5O75023 590 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 TADA3O75528 432 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 ARSAP15289 507 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 FNTBP49356 437 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 RUNX3Q13761 415 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 WDR44Q5JSH3 913 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 LRRC8AQ8IWT6 810 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 FAM186BQ8IYM0 893 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 NELL1Q92832 810 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms