RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 EGLN2Q96KS0 407 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 CCDC77Q9BR77 488 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 SIX2Q9NPC8 291 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 DNAJC17Q9NVM6 304 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 SENP1Q9P0U3 644 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 TBK1Q9UHD2 729 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 H3BNX3 289 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 ATMINO43313 823 aaPredicted RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 AKAP3O75969 853 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 TCEA1P23193 301 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 CHRNA5P30532 468 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 ALDH3B2P48448 385 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 TUFMP49411 452 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 HNRNPFP52597 415 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 C21orf59P57076 290 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 BTKQ06187 659 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 PPATQ06203 517 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 EIF2B5Q13144 721 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 EFTUD2Q15029 972 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS11-207ENST00000620429 KNOP1Q1ED39 458 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 ARSHQ5FYA8 562 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 HYIQ5T013 277 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 NANOGP8Q6NSW7 305 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 RABGEF1Q9UJ41 708 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 CDH7Q9ULB5 785 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 SQORQ9Y6N5 450 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 SCN4AP35499 1836 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 LRRC37AA6NMS7 1700 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 IGSF9BQ9UPX0 1349 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 ZNF701M0R085 212 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 FGFR1P11362 822 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 PRDX6P30041 224 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 SHMT1P34896 483 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 SLC16A2P36021 539 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 CASP4P49662 377 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 HIRAP54198 1017 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 FOXD4Q12950 439 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 ACAP1Q15027 740 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 DLGAP5Q15398 846 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 MAPK6Q16659 721 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 OGFRL1Q5TC84 451 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 LPCAT2Q7L5N7 544 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 MMAAQ8IVH4 418 aaKnown RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 RBM15BQ8NDT2 890 aaKnown RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 HAUS8Q9BT25 410 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 NUP85Q9BW27 656 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 PAIP1Q9H074 479 aaKnown RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 C1orf21Q9H246 121 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 SEPT11Q9NVA2 429 aaKnown RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 MKS1Q9NXB0 559 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 DCTN4Q9UJW0 460 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 SLC30A1Q9Y6M5 507 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 NCANO14594 1321 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 GOLGA8CPA6NN73 597 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 CALUO43852 315 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 RSL1D1O76021 490 aaKnown RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 TGDSO95455 350 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 ZBTB11O95625 1053 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 INHBBP09529 407 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 C6orf222P0C671 652 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 TMEM253P0C7T8 217 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 KRT4P19013 534 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 LMNB1P20700 586 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 RCVRNP35243 200 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 STAT3P40763 770 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 KPNA1P52294 538 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 SLC5A3P53794 718 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 ZBTB16Q05516 673 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 Q3C1V9 767 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 AADACL2Q6P093 401 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 POTEGQ6S5H5 508 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 SIX5Q8N196 739 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 ATP6V0D2Q8N8Y2 350 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 LILRB4Q8NHJ6 448 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 JADE3Q92613 823 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 PRR11Q96HE9 360 aaPredicted RBP10.79□□□□□ -0.68
VPS11-207ENST00000620429 CCDC138Q96M89 665 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 PCDHB13Q9Y5F0 798 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 ZNF536O15090 1300 aa10.79□□□□□ -0.68
VPS11-207ENST00000620429 H3BRJ5 948 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 CLIC2O15247 247 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 NR3C1P04150 777 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 NOVP48745 357 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 CD300CQ08708 224 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 PSMD6Q15008 389 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 SF3B4Q15427 424 aaKnown RBP eCLIP10.78□□□□□ -0.68
VPS11-207ENST00000620429 CCDC14Q49A88 953 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 ALG3Q92685 438 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 SLC35C1Q96A29 364 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 ARHGEF26Q96DR7 871 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 MASTLQ96GX5 879 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 PSD2Q9BQI7 771 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 LIN28AQ9H9Z2 209 aaKnown RBP10.78□□□□□ -0.68
VPS11-207ENST00000620429 KCNK13Q9HB14 408 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 FBXO6Q9NRD1 293 aaPredicted RBP10.78□□□□□ -0.68
VPS11-207ENST00000620429 NINJ2Q9NZG7 142 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 SERPINB13Q9UIV8 391 aa10.78□□□□□ -0.68
VPS11-207ENST00000620429 RBMX2Q9Y388 322 aaKnown RBP10.78□□□□□ -0.68
VPS11-207ENST00000620429 COL11A2P13942 1736 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms