RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CELF4Q9BZC1 486 aaKnown RBP15.52■□□□□ 0.07
COL5A1-208ENST00000618395 OSBPL3Q9H4L5 887 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 NRBP2Q9NSY0 501 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 PDS5AQ29RF7 1337 aaKnown RBP15.52■□□□□ 0.07
COL5A1-208ENST00000618395 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
COL5A1-208ENST00000618395 COLGALT2Q8IYK4 626 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 CASKIN2Q8WXE0 1202 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 PCSK1NQ9UHG2 260 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 TSR3Q9UJK0 312 aaKnown RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 CLK4Q9HAZ1 481 aaKnown RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 RAD18Q9NS91 495 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 POLR1AO95602 1720 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 INPP4BO15327 924 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 CDC25AP30304 524 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 NR1I3Q14994 352 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 L3MBTL3Q96JM7 780 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 PNPLA3Q9NST1 481 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 NUP160Q12769 1436 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 M0R2C6 588 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF682O95780 498 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 SOAT1P35610 550 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 PHC1P78364 1004 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 NAB2Q15742 525 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 ASPRV1Q53RT3 343 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 DNAAF2Q9NVR5 837 aaKnown RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 VPS4AQ9UN37 437 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 RPH3AQ9Y2J0 694 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 YEATS2Q9ULM3 1422 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 OR14I1A6ND48 311 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 CD3EAPO15446 510 aaKnown RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 SDC4P31431 198 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 PLET1Q6UQ28 207 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 CASP12Q6UXS9 341 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 G2E3Q7L622 706 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 PLBD2Q8NHP8 589 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF671Q8TAW3 534 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF333Q96JL9 665 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 MCUBQ9NWR8 336 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 TRIM10Q9UDY6 481 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 F8W810 466 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 TAF5LO75529 589 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 FESP07332 822 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 CAMKK1Q8N5S9 505 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 ACSBG1Q96GR2 724 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 FRMD8Q9BZ67 464 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 MROH9Q5TGP6 573 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 C1orf189Q5VU69 101 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 SULT1C3Q6IMI6 304 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 TTYH1Q9H313 450 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 RMND5AQ9H871 391 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 CMTM6Q9NX76 183 aa15.51■□□□□ 0.07
COL5A1-208ENST00000618395 GPN3Q9UHW5 284 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-208ENST00000618395 MYH1P12882 1939 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 MYH2Q9UKX2 1941 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 MYH4Q9Y623 1939 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 hCG_1984214I3L0E3 225 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 SKIV2L2P42285 1042 aaKnown RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 EGFLAMQ63HQ2 1017 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 ASAP3Q8TDY4 903 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 MYLPFQ96A32 169 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 TSEN34Q9BSV6 310 aaKnown RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 RPF1Q9H9Y2 349 aaKnown RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 RGS17Q9UGC6 210 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 USP17L12C9JPN9 530 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 USP17L21D6R901 530 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 TEX46H3BTG2 121 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 GPR107Q5VW38 600 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 CCSAPQ6IQ19 270 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 DHFR2Q86XF0 187 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 CHCHD6Q9BRQ6 235 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 UGT2B28Q9BY64 529 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 DSN1Q9H410 356 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 TRAPPC3O43617 180 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF746Q6NUN9 644 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 FAM220BPB1ANY3 271 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 SWI5Q1ZZU3 235 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 RAB42Q8N4Z0 105 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 C11orf70Q9BRQ4 267 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 DCLK3Q9C098 648 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF112Q9UJU3 913 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 HS6ST1O60243 411 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 APOC1P02654 83 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 HOXB7P09629 217 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 ADSSP30520 456 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 GDI2P50395 445 aaKnown RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 TMIEQ8NEW7 156 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 DQX1Q8TE96 717 aaKnown RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF594Q96JF6 807 aaPredicted RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF605Q86T29 641 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 HDAC2Q92769 488 aaKnown RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 CD274Q9NZQ7 290 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 WDR35Q9P2L0 1181 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 NR5A2O00482 541 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 CCND2P30279 289 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 TRIM65Q6PJ69 517 aa15.5■□□□□ 0.07
COL5A1-208ENST00000618395 INTS2Q9H0H0 1204 aaKnown RBP15.5■□□□□ 0.07
COL5A1-208ENST00000618395 NOL4O94818 638 aa15.49■□□□□ 0.07
COL5A1-208ENST00000618395 ALDH1A3P47895 512 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms