RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 LRRC4BQ9NT99 713 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 CNTNAP2Q9UHC6 1331 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 USP18Q9UMW8 372 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 RAB27AP51159 221 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 NDST1P52848 882 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 LRIG3Q6UXM1 1119 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 NIPA1Q7RTP0 329 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 LRRC6Q86X45 466 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 TMA16Q96EY4 203 aaKnown RBP19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 NR1H4Q96RI1 486 aaPredicted RBP19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 BRD8Q9H0E9 1235 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 SUFUQ9UMX1 484 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 SNX5Q9Y5X3 404 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 C5orf58C9J3I9 102 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 IL10P22301 178 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 MAPK7Q13164 816 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 ZNF571Q7Z3V5 609 aaPredicted RBP19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 KIRREL3Q8IZU9 778 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 CERS5Q8N5B7 392 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 NAF1Q96HR8 494 aaKnown RBP19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 HIC1Q14526 733 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 IQSEC1Q6DN90 963 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 SPIRE2Q8WWL2 714 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 CEP19Q96LK0 163 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 KCTD10Q9H3F6 313 aa19.21■□□□□ 0.67
AC008878.3-201ENST00000617428 PHF20L1A8MW92 1017 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 CBX4O00257 560 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 RHOCP08134 193 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 SOX11P35716 441 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 PMS1P54277 932 aaKnown RBP19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 ARMC6Q6NXE6 501 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 LACRTQ9GZZ8 138 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 ZCWPW1Q9H0M4 648 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 TSPAN16Q9UKR8 245 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 BARX2Q9UMQ3 279 aaPredicted RBP19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 PCDHAC2Q9Y5I4 1007 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 POLE2P56282 527 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 WASHC5Q12768 1159 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 TTLL9Q3SXZ7 439 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 TTC39BQ5VTQ0 682 aaPredicted RBP19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 DNAAF5Q86Y56 855 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 ZBTB45Q96K62 511 aaPredicted RBP19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 ASB7Q9H672 318 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 PTGISQ16647 500 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 CXCL17Q6UXB2 119 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 ZNF606Q8WXB4 792 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 SMPD4Q9NXE4 827 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 AAR2Q9Y312 384 aaKnown RBP19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 SLIT1O75093 1534 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 CLEC16AQ2KHT3 1053 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 LVRNQ6Q4G3 990 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 MMGT1Q8N4V1 131 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 OTULINQ96BN8 352 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 ROPN1BQ9BZX4 212 aaPredicted RBP19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 ROPN1Q9HAT0 212 aaPredicted RBP19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 NMRK2Q9NPI5 230 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 VPS9D1Q9Y2B5 631 aa19.2■□□□□ 0.66
AC008878.3-201ENST00000617428 SMIM22K7EJ46 135 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 MYO1CO00159 1063 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 PROSCO94903 275 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 LSM8O95777 96 aaKnown RBP19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 POU4F1Q01851 419 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 FAM83EQ2M2I3 478 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 ZPBP2Q6X784 338 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 ABRAQ8N0Z2 381 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 KAT2BQ92831 832 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 SPATA16Q9BXB7 569 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 VIPAS39Q9H9C1 493 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 PSD3Q9NYI0 1048 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 TEKT2Q9UIF3 430 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 TRMT6Q9UJA5 497 aaKnown RBP19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 PCDHB5Q9Y5E4 795 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 SLURP2P0DP57 97 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 RHOAP61586 193 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 FAM136AQ96C01 138 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 MRPL1Q9BYD6 325 aaKnown RBP19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 CDH8P55286 799 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 ZIM3Q96PE6 472 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 GAKO14976 1311 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 DISP2A7MBM2 1401 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 LGALS2P05162 132 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 EPB42P16452 691 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 MZF1P28698 734 aaPredicted RBP19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 PPIL2Q13356 520 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 E2F4Q16254 413 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 ANO5Q75V66 913 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 TRIM48Q8IWZ4 208 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 ARMC2Q8NEN0 867 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 TINF2Q9BSI4 451 aa19.19■□□□□ 0.66
AC008878.3-201ENST00000617428 VGLL3A8MV65 326 aa19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 MAPTP10636 758 aaKnown RBP19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 UBA1P22314 1058 aaKnown RBP19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 SERPINB4P48594 390 aa19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 DDX39BQ13838 428 aaKnown RBP19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 TIGD7Q6NT04 549 aaPredicted RBP19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 COPS5Q92905 334 aa19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 ARHGAP20Q9P2F6 1191 aa19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 ITSN1Q15811 1721 aa19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 SRP72O76094 671 aaKnown RBP19.18■□□□□ 0.66
AC008878.3-201ENST00000617428 KRT72Q14CN4 511 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms