RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 KCNT2Q6UVM3 1135 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SUGP1Q8IWZ8 645 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLITRK1Q96PX8 696 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 RNF19AQ9NV58 838 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 PCMTD2Q9NV79 361 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SETD4Q9NVD3 440 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 MID2Q9UJV3 735 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 INPP5FQ9Y2H2 1132 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ATP8B3O60423 1300 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 LACTBL1A8MY62 500 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ADM5C9JUS6 153 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 B4GALT4O60513 344 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 B3GAT3O94766 335 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 LCP1P13796 627 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ARL2P36404 184 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 GNL1P36915 607 aaPredicted RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF280AP59817 542 aaPredicted RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 YWHAZP63104 245 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 TXNRD3NBQ6F5E7 133 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ANKS1BQ7Z6G8 1248 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLC35B2Q8TB61 432 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SPOCK2Q92563 424 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZBTB10Q96DT7 871 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ATXN7L3BQ96GX2 97 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 MAGEB18Q96M61 343 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 MANSC1Q9H8J5 431 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 DDIT4Q9NX09 232 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 DPP3Q9NY33 737 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 RGPD2P0DJD1 1756 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 LRP6O75581 1613 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 H3BRJ5 948 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 GIPC1O14908 333 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 TARSP26639 723 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 PGM1P36871 562 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 NME3Q13232 169 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 XRCC4Q13426 336 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 EMC10Q5UCC4 262 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 MON1BQ7L1V2 547 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 MTDHQ86UE4 582 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 PGBD4Q96DM1 585 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CAMKK2Q96RR4 588 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 NACA2Q9H009 215 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 EP300Q09472 2414 aaPredicted RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZDBF2Q9HCK1 2354 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPR25O00155 361 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 HSPA4LO95757 839 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 KITP10721 976 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 NCF2P19878 526 aaPredicted RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SERPINB6P35237 376 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 TAF6P49848 677 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 MPP2Q14168 576 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 PDK2Q15119 407 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 TAF12Q16514 161 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 GNASQ5JWF2 1037 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SWT1Q5T5J6 900 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 UNC45BQ8IWX7 931 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 GPC2Q8N158 579 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 FITM2Q8N6M3 262 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SLCO2A1Q92959 643 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ZNF317Q96PQ6 595 aaPredicted RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ACO2Q99798 780 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 NIFKQ9BYG3 293 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.86□□□□□ -1.471e-7■■■□□ 16.4
SYNCRIP-204ENST00000616122 POLIQ9UNA4 740 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 AP4E1Q9UPM8 1137 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 PPP2R3BQ9Y5P8 575 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ASCC3Q8N3C0 2202 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 BAZ2AQ9UIF9 1905 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 GRIN3BO60391 1043 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CFHP08603 1231 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ABHD2P08910 425 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CYP2B6P20813 491 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CDC42EP1Q00587 391 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 DEUP1Q05D60 604 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 PDK1Q15118 436 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 MTFR1Q15390 333 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 EFHC1Q5JVL4 640 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 NXNQ6DKJ4 435 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 RWDD4Q6NW29 188 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 DPY19L2P1Q6NXN4 242 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CYP4X1Q8N118 509 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 OR6P1Q8NGX9 317 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SCYL1Q96KG9 808 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SRPK1Q96SB4 655 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 APOL2Q9BQE5 337 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 VCX3BQ9H321 246 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ABHD16BQ9H3Z7 469 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 SMYD3Q9H7B4 428 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 CYP4F11Q9HBI6 524 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 RXFP1Q9HBX9 757 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 ADARB2Q9NS39 739 aaKnown RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 GRID1Q9ULK0 1009 aa5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 MAFBQ9Y5Q3 323 aaPredicted RBP5.86□□□□□ -1.47
SYNCRIP-204ENST00000616122 C5orf60A6NFR6 353 aa5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 CCDC160A6NGH7 325 aa5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 EDF1O60869 148 aaKnown RBP5.85□□□□□ -1.47
SYNCRIP-204ENST00000616122 LGALS2P05162 132 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms