RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 XRCC4Q13426 336 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 SEC23AQ15436 765 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 AGAP9Q5VTM2 703 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 NAT9Q9BTE0 207 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 UTP6Q9NYH9 597 aaKnown RBP19.5■□□□□ 0.71
SPAST-203ENST00000615843 STMN3Q9NZ72 180 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 C5orf58C9J3I9 102 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 FCGR1AP12314 374 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 TTLL4Q14679 1199 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 RNF43Q68DV7 783 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 EVPLLA8MZ36 301 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 SHBGP04278 402 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 TBCELQ5QJ74 424 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 CIAPIN1Q6FI81 312 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 WDR60Q8WVS4 1066 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 GRIP2Q9C0E4 1043 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 KIAA1683Q9H0B3 1180 aa19.5■□□□□ 0.71
SPAST-203ENST00000615843 HEATR9A2RTY3 570 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ADRA1DP25100 572 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 SOX6P35712 828 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 GLRBP48167 497 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 LRRC74AQ0VAA2 488 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ZCCHC7Q8N3Z6 543 aaKnown RBP19.49■□□□□ 0.71
SPAST-203ENST00000615843 CCDC126Q96EE4 140 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 CBWD1Q9BRT8 395 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 COPG2Q9UBF2 871 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 DDX3XO00571 662 aaKnown RBP eCLIP19.49■□□□□ 0.712e-7■■■■□ 20
SPAST-203ENST00000615843 PECAM1P16284 738 aaPredicted RBP19.49■□□□□ 0.71
SPAST-203ENST00000615843 SLC1A6P48664 564 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 RAB14P61106 215 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 FAM182BQ5T319 152 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 TSHZ1Q6ZSZ6 1077 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 PLEKHM3Q6ZWE6 761 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 PABPC5Q96DU9 382 aaKnown RBP19.49■□□□□ 0.71
SPAST-203ENST00000615843 TBC1D10AQ9BXI6 508 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ZCWPW1Q9H0M4 648 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ADGRB3O60242 1522 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ALADP13716 330 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 PRKCEQ02156 737 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 TRIM25Q14258 630 aaKnown RBP19.49■□□□□ 0.71
SPAST-203ENST00000615843 CLEC16AQ2KHT3 1053 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 GOLGA7BQ2TAP0 167 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 TAF2Q6P1X5 1199 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ZFP1Q6P2D0 407 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ANKEF1Q9NU02 776 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 THAP1Q9NVV9 213 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 MPP6Q9NZW5 540 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 PNMA3Q9UL41 463 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 LINC00854A0A1B0GVQ3 168 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 TNPO2O14787 897 aaKnown RBP19.49■□□□□ 0.71
SPAST-203ENST00000615843 EARS2Q5JPH6 523 aaKnown RBP19.49■□□□□ 0.71
SPAST-203ENST00000615843 LINC00523Q86TU6 105 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ZNF34Q8IZ26 560 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 APPL2Q8NEU8 664 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 ACTL9Q8TC94 416 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 GCNAQ96QF7 691 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 SRPK1Q96SB4 655 aaKnown RBP19.49■□□□□ 0.71
SPAST-203ENST00000615843 KCTD10Q9H3F6 313 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 CTNNAL1Q9UBT7 734 aa19.49■□□□□ 0.71
SPAST-203ENST00000615843 IL18RAPO95256 599 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 SERPINE1P05121 402 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 PDGFRBP09619 1106 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 ATP6V1C1P21283 382 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 ACADSBP45954 432 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 NDEL1Q9GZM8 345 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 IMPAD1Q9NX62 359 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 LMCD1Q9NZU5 365 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 PCDHA3Q9Y5H8 950 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 TNS3Q68CZ2 1445 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 ZC3H11AO75152 810 aaKnown RBP eCLIP19.48■□□□□ 0.71
SPAST-203ENST00000615843 BLVRAP53004 296 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 PKP3Q9Y446 797 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 ATXN8OSP0DMR3 200 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 DMPKQ09013 629 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 AUHQ13825 339 aaKnown RBP19.48■□□□□ 0.71
SPAST-203ENST00000615843 NFYCQ13952 458 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 SF3B3Q15393 1217 aaKnown RBP19.48■□□□□ 0.71
SPAST-203ENST00000615843 DCAF6Q58WW2 860 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 CROCCP3Q8IVE0 287 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 MTERF3Q96E29 417 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 TARS2Q9BW92 718 aaKnown RBP19.48■□□□□ 0.71
SPAST-203ENST00000615843 ATP5BP06576 529 aaKnown RBP19.48■□□□□ 0.71
SPAST-203ENST00000615843 HIST1H2AGP0C0S8 130 aaPredicted RBP19.48■□□□□ 0.71
SPAST-203ENST00000615843 HIST1H2ADP20671 130 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 FASP25445 335 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 SSTR1P30872 391 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 RRP1BQ14684 758 aaKnown RBP19.48■□□□□ 0.71
SPAST-203ENST00000615843 PYDC1Q8WXC3 89 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 HIST1H2AHQ96KK5 128 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 HIST1H2AJQ99878 128 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 H2AFJQ9BTM1 129 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 ZMYND8Q9ULU4 1186 aaPredicted RBP19.48■□□□□ 0.71
SPAST-203ENST00000615843 ATXN2Q99700 1313 aaKnown RBP19.48■□□□□ 0.71
SPAST-203ENST00000615843 ELK3P41970 407 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 NME5P56597 212 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 BBS7Q8IWZ6 715 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 RNPEPQ9H4A4 650 aa19.48■□□□□ 0.71
SPAST-203ENST00000615843 SPATA31A3Q5VYP0 1347 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 ENTPD5O75356 428 aa19.47■□□□□ 0.71
SPAST-203ENST00000615843 N4BP2L1Q5TBK1 243 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms