RNA–Protein interactions for RNA: ENST00000614565.4

CDH4-203, Transcript of cadherin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH4, Length 6,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-203ENST00000614565 TBX20Q9UMR3 447 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 RFX5P48382 616 aaPredicted RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 PPP1R16AQ96I34 528 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 INTS9Q9NV88 658 aaKnown RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 RASGRF2O14827 1237 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 KATNA1O75449 491 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 ZFXP17010 805 aaPredicted RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 TCEA1P23193 301 aaKnown RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 C2orf54Q08AI8 447 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 EDRF1Q3B7T1 1238 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 LPCAT1Q8NF37 534 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 AUTS2Q8WXX7 1259 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 C11orf84Q9BUA3 381 aaPredicted RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 PORCNQ9H237 461 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 ATP13A1Q9HD20 1204 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 TTI1O43156 1089 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 PARNO95453 639 aaKnown RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 CCDC130P13994 396 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 AMZ1Q400G9 498 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 RWDD3Q9Y3V2 267 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 KANSL1LA0AUZ9 987 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 RNASEH2AO75792 299 aaKnown RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 PDCD2LQ9BRP1 358 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 OXCT2Q9BYC2 517 aaPredicted RBP13.07□□□□□ -0.32
CDH4-203ENST00000614565 TEKT2Q9UIF3 430 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 PCDHA13Q9Y5I0 950 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 FHOD1Q9Y613 1164 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 TOPAZ1Q8N9V7 1692 aa13.07□□□□□ -0.32
CDH4-203ENST00000614565 C2orf81A6NN90 581 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 RECQL4O94761 1208 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 ZNF200P98182 395 aaPredicted RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 ZC3H12BQ5HYM0 836 aaKnown RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 CELF3Q5SZQ8 465 aaKnown RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 SLC27A1Q6PCB7 646 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 TSTD1Q8NFU3 115 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 PTPRN2Q92932 1015 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 MRFAP1L1Q96HT8 127 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 FAM129AQ9BZQ8 928 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 THAP9Q9H5L6 903 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 EPB41L4AQ9HCS5 686 aaPredicted RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 MAPK8P45983 427 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 PEX5P50542 639 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 COPS2P61201 443 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 DMWDQ09019 674 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 FAM110CQ1W6H9 321 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 APOBEC3HQ6NTF7 200 aaKnown RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 TTC17Q96AE7 1141 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 RIT2Q99578 217 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 TIPINQ9BVW5 301 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 TEX12Q9BXU0 123 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 UBXN6Q9BZV1 441 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 SUN1O94901 812 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 GPC1P35052 558 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 ALDH9A1P49189 494 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 RAET1GQ6H3X3 334 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 CXorf38Q8TB03 319 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 DCBLD2Q96PD2 775 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 ADH1CP00326 375 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 GTF2E2P29084 291 aaKnown RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 EPHB4P54760 987 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 ETF1P62495 437 aaKnown RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 SPATS2Q86XZ4 545 aaKnown RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 NALCNQ8IZF0 1738 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 E2F6O75461 281 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 APRTP07741 180 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 DPCR1Q3MIW9 517 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 GDF6Q6KF10 455 aaPredicted RBP13.06□□□□□ -0.32
CDH4-203ENST00000614565 CATSPER3Q86XQ3 398 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 SHDQ96IW2 340 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 EPB41L5Q9HCM4 733 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 PYCARDQ9ULZ3 195 aa13.06□□□□□ -0.32
CDH4-203ENST00000614565 CCDC151A5D8V7 595 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 SH3BGRLO75368 114 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 USP17L7P0C7H9 530 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 STILQ15468 1287 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 TSGA10IPQ3SY00 556 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 COLGALT2Q8IYK4 626 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 FBXO44Q9H4M3 255 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 C1QTNF3-AMACRE9PGA6 284 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 OGTO15294 1046 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 TIE1P35590 1138 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 CASP4P49662 377 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 RESTQ13127 1097 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 TP53BP2Q13625 1128 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 BOP1Q14137 746 aaKnown RBP13.05□□□□□ -0.32
CDH4-203ENST00000614565 ANKRD20A4Q4UJ75 823 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 ANKRD20A8PQ5CZ79 823 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 ANKRD20A2Q5SQ80 823 aa13.05□□□□□ -0.32
CDH4-203ENST00000614565 ANKRD20A1Q5TYW2 823 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms