RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 VSTM1Q6UX27 236 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 PHLDB2Q86SQ0 1253 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 PIGZQ86VD9 579 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 WDTC1Q8N5D0 677 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 MRPL43Q8N983 215 aaKnown RBP13.53□□□□□ -0.24
PRKN-210ENST00000612540 CTNNBL1Q8WYA6 563 aaPredicted RBP13.53□□□□□ -0.24
PRKN-210ENST00000612540 HLA-CQ95604 372 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 PPP1R13BQ96KQ4 1090 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 CPXM1Q96SM3 734 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 KCNK16Q96T55 309 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 LRRC4Q9HBW1 653 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 TMEM30AQ9NV96 361 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 NENFQ9UMX5 172 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 REXO2Q9Y3B8 237 aaKnown RBP13.53□□□□□ -0.24
PRKN-210ENST00000612540 IRAK3Q9Y616 596 aa13.53□□□□□ -0.24
PRKN-210ENST00000612540 ZNF638Q14966 1978 aaKnown RBP13.52□□□□□ -0.24
PRKN-210ENST00000612540 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 E5RJQ4 531 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 GOLGA8SH3BPF8 625 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 VNN2O95498 520 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 HAPLN1P10915 354 aaPredicted RBP13.52□□□□□ -0.25
PRKN-210ENST00000612540 ACADSBP45954 432 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 PLA2G4AP47712 749 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 VAV2P52735 878 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 SNX16P57768 344 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 RPL10AP62906 217 aaKnown RBP13.52□□□□□ -0.25
PRKN-210ENST00000612540 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
PRKN-210ENST00000612540 ADIGQ0VDE8 80 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 DDR2Q16832 855 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 OR6B2Q6IFH4 312 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 MON1BQ7L1V2 547 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 PHF13Q86YI8 300 aaPredicted RBP13.52□□□□□ -0.25
PRKN-210ENST00000612540 MCOLN2Q8IZK6 566 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 SIX6OS1Q8N1H7 587 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 ZMIZ2Q8NF64 920 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 ZNF461Q8TAF7 563 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 SLC35F5Q8WV83 523 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 TRIM11Q96F44 468 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 MIS12Q9H081 205 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 ISCUQ9H1K1 167 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 CRISPLD1Q9H336 500 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 MYO1AQ9UBC5 1043 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 TJP2Q9UDY2 1190 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 TFR2Q9UP52 801 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 PPP2R2CQ9Y2T4 447 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 YIPF1Q9Y548 306 aa13.52□□□□□ -0.25
PRKN-210ENST00000612540 ANKRD62A6NC57 917 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 ZSCAN12O43309 604 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 TGM5O43548 720 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 ABLIM3O94929 683 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 SEC24AO95486 1093 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 ERBB2P04626 1255 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 ATF2P15336 505 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 MMP8P22894 467 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 TUFMP49411 452 aaKnown RBP13.51□□□□□ -0.25
PRKN-210ENST00000612540 ARHGAP29Q52LW3 1261 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 GPRIN1Q7Z2K8 1008 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 RBM23Q86U06 439 aaKnown RBP13.51□□□□□ -0.25
PRKN-210ENST00000612540 STKLD1Q8NE28 680 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 STK32AQ8WU08 396 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 C18orf8Q96DM3 657 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 HSFY1Q96LI6 401 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 C8orf48Q96LL4 319 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 SLC4A5Q9BY07 1137 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 THAP2Q9H0W7 228 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 TRMT1Q9NXH9 659 aaKnown RBP13.51□□□□□ -0.25
PRKN-210ENST00000612540 CNOT8Q9UFF9 292 aaKnown RBP13.51□□□□□ -0.25
PRKN-210ENST00000612540 STRIP2Q9ULQ0 834 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 GREB1Q4ZG55 1949 aa13.51□□□□□ -0.25
PRKN-210ENST00000612540 PER2O15055 1255 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 CCP110O43303 1012 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 CLASP2O75122 1294 aaKnown RBP13.5□□□□□ -0.25
PRKN-210ENST00000612540 TMEM253P0C7T8 217 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 MYBL1P10243 752 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 ALDH1A3P47895 512 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 TKTL1P51854 596 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 GPC5P78333 572 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 KIF5AQ12840 1032 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 VEPH1Q14D04 833 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 TAF12Q16514 161 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 LLGL2Q6P1M3 1020 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 DNAJC24Q6P3W2 148 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 CCDC149Q6ZUS6 474 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 FAM183BPQ6ZVS7 135 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 ADGRD2Q7Z7M1 963 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 C17orf53Q8N3J3 647 aaPredicted RBP13.5□□□□□ -0.25
PRKN-210ENST00000612540 KREMEN2Q8NCW0 462 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 SLC7A14Q8TBB6 771 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 GIPC2Q8TF65 315 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 PPP2R3CQ969Q6 453 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 ARHGEF26Q96DR7 871 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 MRPL38Q96DV4 380 aaKnown RBP13.5□□□□□ -0.25
PRKN-210ENST00000612540 ULBP1Q9BZM6 244 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 TLE6Q9H808 572 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 CSNK1G1Q9HCP0 422 aa13.5□□□□□ -0.25
PRKN-210ENST00000612540 LZTFL1Q9NQ48 299 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms