RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	LAMTOR4	Q0VGL1	99 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	PTP4A2	Q12974	167 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	CDO1	Q16878	200 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	TFDP3	Q5H9I0	405 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	MFSD4B	Q5TF39	518 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	LRRC74B	Q6ZQY2	392 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	ZCCHC9	Q8N567	271 aa	Known RBP	12	□□□□□ -0.49
EP400-208	ENST00000611841	TUBGCP5	Q96RT8	1024 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	PDP2	Q9P2J9	529 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	TMCO1	Q9UM00	188 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	GINS2	Q9Y248	185 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	AFG3L2	Q9Y4W6	797 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	SIGLEC16	A6NMB1	481 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	TBX10	O75333	385 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	GRAP2	O75791	330 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	MAP3K6	O95382	1288 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	KLRC2	P26717	231 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	RASSF2	P50749	326 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	CLDN10	P78369	228 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	OTUD4	Q01804	1114 aa	Known RBP	12	□□□□□ -0.49
EP400-208	ENST00000611841	KPNB1	Q14974	876 aa	Known RBP	12	□□□□□ -0.49
EP400-208	ENST00000611841	HSDL1	Q3SXM5	330 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12	□□□□□ -0.49
EP400-208	ENST00000611841	TNFAIP8L3	Q5GJ75	292 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	TREML2	Q5T2D2	321 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	RNF43	Q68DV7	783 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	BRSK2	Q8IWQ3	736 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	JOSD2	Q8TAC2	188 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	TRPM4	Q8TD43	1214 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	GATA6	Q92908	595 aa		12	□□□□□ -0.49
EP400-208	ENST00000611841	C12orf65	Q9H3J6	166 aa	Known RBP	12	□□□□□ -0.49
EP400-208	ENST00000611841	LYN	P07948	512 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	RPA3	P35244	121 aa	Predicted RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	OAZ1	P54368	228 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	WDR4	P57081	412 aa	Known RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	ZNF252P-AS1	Q0IIN9	211 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	SFSWAP	Q12872	951 aa	Known RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	HIF1A	Q16665	826 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	EAPP	Q56P03	285 aa	Predicted RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	WASHC2D	Q5SRD0	308 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	SCYL2	Q6P3W7	929 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	C3orf62	Q6ZUJ4	267 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	RIBC1	Q8N443	379 aa	Predicted RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	PCYT2	Q99447	389 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	FAM192A	Q9GZU8	254 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	STYXL1	Q9Y6J8	313 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	PCNT	O95613	3336 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	OGT	O15294	1046 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	MAP3K7	O43318	606 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	FARP2	O94887	1054 aa	Predicted RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	CD48	P09326	243 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	T-ENOL	P0DO92	83 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	KRT4	P19013	534 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	POLR2B	P30876	1174 aa	Known RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	CLCN3	P51790	818 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	PIGH	Q14442	188 aa	Predicted RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	MTFR1	Q15390	333 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	ZRSR2	Q15696	482 aa	Known RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	HADH	Q16836	314 aa	Known RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	TAF1B	Q53T94	588 aa	Predicted RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	RNF168	Q8IYW5	571 aa	Predicted RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	WDTC1	Q8N5D0	677 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	FAM71D	Q8N9W8	422 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	UBA3	Q8TBC4	463 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	FBXO41	Q8TF61	875 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	KLRG1	Q96E93	195 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	ANKRD36BP1	Q96IX9	119 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	MAK16	Q9BXY0	300 aa	Known RBP	11.99	□□□□□ -0.49
EP400-208	ENST00000611841	R3HDML	Q9H3Y0	253 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	GINM1	Q9NU53	330 aa		11.99	□□□□□ -0.49
EP400-208	ENST00000611841	OPHN1	O60890	802 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	CXCL8	P10145	99 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	TAC1	P20366	129 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	RPS12	P25398	132 aa	Known RBP	11.98	□□□□□ -0.49
EP400-208	ENST00000611841	SERPINB3	P29508	390 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	VCP	P55072	806 aa	Known RBP	11.98	□□□□□ -0.49
EP400-208	ENST00000611841	TFDP1	Q14186	410 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	SPARCL1	Q14515	664 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	TAF5	Q15542	800 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	CMPK2	Q5EBM0	449 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	ZNF667	Q5HYK9	610 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	EEF1DP3	Q658K8	133 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	WDR49	Q8IV35	697 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	KBTBD2	Q8IY47	623 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	TMEM192	Q8IY95	271 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	ALLC	Q8N6M5	410 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	STMN2	Q93045	179 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	CLMN	Q96JQ2	1002 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	MAGEB18	Q96M61	343 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	HEXIM2	Q96MH2	286 aa	Known RBP	11.98	□□□□□ -0.49
EP400-208	ENST00000611841	VPS33B	Q9H267	617 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	CLIC5	Q9NZA1	410 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	hCG_1818297	A0A087WSY0	165 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	PDLIM1	O00151	329 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	TMCC1	O94876	653 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	EFNA5	P52803	228 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	GDF10	P55107	478 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
EP400-208	ENST00000611841	PTPN20	Q4JDL3	420 aa		11.98	□□□□□ -0.49
EP400-208	ENST00000611841	LIN52	Q52LA3	116 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms