RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 EP300Q09472 2414 aaPredicted RBP9.21□□□□□ -0.94
SNCA-212ENST00000611107 OTOGLQ3ZCN5 2332 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 CLSTN1O94985 981 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 AFPP02771 609 aaKnown RBP9.2□□□□□ -0.94
SNCA-212ENST00000611107 CSH1P0DML2 217 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 CSH2P0DML3 217 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 ATP1A3P13637 1013 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 EEF1GP26641 437 aaKnown RBP9.2□□□□□ -0.94
SNCA-212ENST00000611107 CDC25CP30307 473 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 GRIK1P39086 918 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 MTIF2P46199 727 aaKnown RBP9.2□□□□□ -0.94
SNCA-212ENST00000611107 ZNF165P49910 485 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 MRE11P49959 708 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 RPL10AP62906 217 aaKnown RBP9.2□□□□□ -0.94
SNCA-212ENST00000611107 MESP2Q0VG99 397 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 VEPH1Q14D04 833 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 IQCB1Q15051 598 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 KRT31Q15323 416 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 ANGPT1Q15389 498 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 MAN2A1Q16706 1144 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 GAB4Q2WGN9 574 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 TCP11X2Q5H9J9 407 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 PKN3Q6P5Z2 889 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 TSSK4Q6SA08 328 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 Q6ZS52 159 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 ASCL5Q7RTU5 278 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 APTXQ7Z2E3 356 aaKnown RBP9.2□□□□□ -0.94
SNCA-212ENST00000611107 MON1AQ86VX9 555 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 LMO3Q8TAP4 145 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 TAF4BQ92750 862 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 EZH1Q92800 747 aaPredicted RBP9.2□□□□□ -0.94
SNCA-212ENST00000611107 KAT5Q92993 513 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 TRMT2BQ96GJ1 504 aaKnown RBP9.2□□□□□ -0.94
SNCA-212ENST00000611107 FUBP3Q96I24 572 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNCA-212ENST00000611107 SPATA17Q96L03 361 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 C8orf48Q96LL4 319 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 TTLL2Q9BWV7 592 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 IMPG2Q9BZV3 1241 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 NIF3L1Q9GZT8 377 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 LINC00597Q9H2U6 94 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 BRD9Q9H8M2 597 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 GKN1Q9NS71 199 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 OSER1Q9NX31 292 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 RAB20Q9NX57 234 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 SIT1Q9Y3P8 196 aa9.2□□□□□ -0.94
SNCA-212ENST00000611107 R3HCC1Q9Y3T6 440 aaKnown RBP9.2□□□□□ -0.94
SNCA-212ENST00000611107 ZNF263O14978 683 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 P4HA2O15460 535 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 CILPO75339 1184 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 GABBR2O75899 941 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 FAM163BP0C2L3 166 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 CD58P19256 250 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 ADORA2BP29275 332 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 WEE1P30291 646 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 PTPN5P54829 565 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 PRKCQQ04759 706 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 DMWDQ09019 674 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 INCA1Q0VD86 236 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 IFRD2Q12894 506 aaPredicted RBP9.19□□□□□ -0.94
SNCA-212ENST00000611107 TAF10Q12962 218 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 USP4Q13107 963 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 ZNF77Q15935 545 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 SGSM1Q2NKQ1 1148 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 ZNF394Q53GI3 561 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 VSTM1Q6UX27 236 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 SFTPA1Q8IWL2 248 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 CRYBG2Q8N1P7 616 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 UBR7Q8N806 425 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 TTC16Q8NEE8 873 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 SLC2A14Q8TDB8 520 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 BPIFB1Q8TDL5 484 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 DEPDC1BQ8WUY9 529 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 DNASE1L2Q92874 299 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 CLDN23Q96B33 292 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 P2RY11Q96G91 374 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 FAM83CQ9BQN1 747 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 ZSWIM1Q9BR11 485 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 TUBGCP2Q9BSJ2 902 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 NAT10Q9H0A0 1025 aaKnown RBP9.19□□□□□ -0.94
SNCA-212ENST00000611107 KCNH6Q9H252 994 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 EBF3Q9H4W6 596 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 CBX8Q9HC52 389 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 TRPC7Q9HCX4 862 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 KRT82Q9NSB4 513 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 TAB2Q9NYJ8 693 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 IL37Q9NZH6 218 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 CHORDC1Q9UHD1 332 aaPredicted RBP9.19□□□□□ -0.94
SNCA-212ENST00000611107 WNT6Q9Y6F9 365 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 PIAS3Q9Y6X2 628 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 R4GN57 208 aa9.19□□□□□ -0.94
SNCA-212ENST00000611107 GTPBP10A4D1E9 387 aaKnown RBP9.18□□□□□ -0.94
SNCA-212ENST00000611107 ZNF840PA6NDX5 716 aa9.18□□□□□ -0.94
SNCA-212ENST00000611107 RNF225M0QZC1 329 aaPredicted RBP9.18□□□□□ -0.94
SNCA-212ENST00000611107 TULP2O00295 520 aa9.18□□□□□ -0.94
SNCA-212ENST00000611107 CHADO15335 359 aa9.18□□□□□ -0.94
SNCA-212ENST00000611107 AP1G2O75843 785 aa9.18□□□□□ -0.94
SNCA-212ENST00000611107 OAS1P00973 400 aaKnown RBP9.18□□□□□ -0.94
SNCA-212ENST00000611107 SP9P0CG40 484 aa9.18□□□□□ -0.94
SNCA-212ENST00000611107 CHRNB1P11230 501 aa9.18□□□□□ -0.94
SNCA-212ENST00000611107 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms