RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 TNFRSF4P43489 277 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 PSMC1P62191 440 aaKnown RBP18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 SEMA3BQ13214 749 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 ZNF423Q2M1K9 1284 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 OSTM1Q86WC4 334 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 FRMD1Q8N878 549 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 SLITRK1Q96PX8 696 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 PKMYT1Q99640 499 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 CFAP97Q9P2B7 532 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 TBC1D14Q9P2M4 693 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 SEL1LQ9UBV2 794 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 PILRBQ9UKJ0 227 aa18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 HELZP42694 1942 aaKnown RBP18.53■□□□□ 0.56
CHMP4A-211ENST00000609024 GABRDO14764 452 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 TNNC2P02585 160 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 SYPP08247 313 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 SERPINF2P08697 491 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 MBL2P11226 248 aaPredicted RBP18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 SLC7A9P82251 487 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 MAP7D1Q3KQU3 841 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 TDRD10Q5VZ19 366 aaKnown RBP18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 FAM171BQ6P995 826 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 HS2ST1Q7LGA3 356 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 CHCHD4Q8N4Q1 142 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 SPRYD3Q8NCJ5 442 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 MMS19Q96T76 1030 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 IKZF4Q9H2S9 585 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 TBC1D7Q9P0N9 293 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 CCDC39Q9UFE4 941 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 MBD1Q9UIS9 605 aaPredicted RBP18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 PCDHB13Q9Y5F0 798 aa18.52■□□□□ 0.56
CHMP4A-211ENST00000609024 ASCC3Q8N3C0 2202 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 ANAPC1Q9H1A4 1944 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 GOLGA8IPA6NC78 632 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 ZNF840PA6NDX5 716 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 ANTXRLA6NF34 631 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 GOLGA8JA6NMD2 632 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 SCAMP3O14828 347 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 HCRTO43612 131 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 ATP2C2O75185 946 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 PDGFRBP09619 1106 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 HNRNPLP14866 589 aaKnown RBP eCLIP18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 GAP43P17677 238 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 GARTP22102 1010 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 GAD2Q05329 585 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 IFRD2Q12894 506 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 CCDC142Q17RM4 750 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 SOWAHAQ2M3V2 549 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 L1TD1Q5T7N2 865 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 EMC10Q5UCC4 262 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 SDE2Q6IQ49 451 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 PIP4P1Q86T03 277 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 MINDY1Q8N5J2 469 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 DEFB119Q8N690 84 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 HPDLQ96IR7 371 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 MTMR12Q9C0I1 747 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 SNX25Q9H3E2 840 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 ASPMQ8IZT6 3477 aa18.51■□□□□ 0.55
CHMP4A-211ENST00000609024 AKAP13Q12802 2813 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 PKD1L2Q7Z442 2459 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 ANKRD11Q6UB99 2663 aaPredicted RBP18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 SPEGQ15772 3267 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 GAB4Q2WGN9 574 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 ZNF513Q8N8E2 541 aaPredicted RBP18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 KCNV2Q8TDN2 545 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 RNF38Q9H0F5 515 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 PDE11AQ9HCR9 933 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 ZDHHC4Q9NPG8 344 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 FSCN3Q9NQT6 498 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 DEC1Q9P2X7 70 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 SH3BP1Q9Y3L3 701 aa18.5■□□□□ 0.55
CHMP4A-211ENST00000609024 LMO2P25791 158 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 TXLNAP40222 546 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 KIR2DL1P43626 348 aaPredicted RBP18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 WNT7BP56706 349 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 USP46P62068 366 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 NOP14P78316 857 aaKnown RBP18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 ZXDBP98169 803 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 ZNF33AQ06730 810 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 ALCAMQ13740 583 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 SURF1Q15526 300 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 RHBDF2Q6PJF5 856 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 SV2BQ7L1I2 683 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 SFTPA1Q8IWL2 248 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 RGL4Q8IZJ4 473 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 PCIF1Q9H4Z3 704 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 CRTAC1Q9NQ79 661 aa18.49■□□□□ 0.55
CHMP4A-211ENST00000609024 A0A0A0MRY4 1105 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 F8VP50 259 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 ARHGAP33O14559 1287 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 ZNF217O75362 1048 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 PRPF6O94906 941 aaKnown RBP18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 HOXB2P14652 356 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 IDEP14735 1019 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 GJB2P29033 226 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 KCNA1Q09470 495 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 TAF10Q12962 218 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 DUOXA2Q1HG44 320 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 ANO4Q32M45 955 aa18.48■□□□□ 0.55
CHMP4A-211ENST00000609024 MDH1BQ5I0G3 518 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms