RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 NETO2Q8NC67 525 aa16.03■□□□□ 0.16
AC009961.1-203ENST00000607836 SMG8Q8ND04 991 aaKnown RBP16.03■□□□□ 0.16
AC009961.1-203ENST00000607836 FNIP1Q8TF40 1166 aa16.03■□□□□ 0.16
AC009961.1-203ENST00000607836 FAM172AQ8WUF8 416 aa16.03■□□□□ 0.16
AC009961.1-203ENST00000607836 LPPQ93052 612 aa16.03■□□□□ 0.16
AC009961.1-203ENST00000607836 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
AC009961.1-203ENST00000607836 ASNSD1Q9NWL6 643 aa16.03■□□□□ 0.16
AC009961.1-203ENST00000607836 MAGEA4P43358 317 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 COPS2P61201 443 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 PURAQ00577 322 aaKnown RBP16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 OLFML1Q6UWY5 402 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 SAPCD2Q86UD0 394 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 CCDC13Q8IYE1 715 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 SLC35B2Q8TB61 432 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 SLC2A14Q8TDB8 520 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 KHSRPQ92945 711 aaKnown RBP eCLIP16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 CNTN3Q9P232 1028 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 HESX1Q9UBX0 185 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 HEY1Q9Y5J3 304 aa16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 TIMM13Q9Y5L4 95 aaPredicted RBP16.02■□□□□ 0.16
AC009961.1-203ENST00000607836 HAS3O00219 553 aa16.02■□□□□ 0.15
AC009961.1-203ENST00000607836 GNL1P36915 607 aaPredicted RBP16.02■□□□□ 0.15
AC009961.1-203ENST00000607836 ZBED8Q8IZ13 594 aa16.02■□□□□ 0.15
AC009961.1-203ENST00000607836 SPATA18Q8TC71 538 aa16.02■□□□□ 0.15
AC009961.1-203ENST00000607836 SLC35F5Q8WV83 523 aa16.02■□□□□ 0.15
AC009961.1-203ENST00000607836 TPX2Q9ULW0 747 aaKnown RBP16.02■□□□□ 0.15
AC009961.1-203ENST00000607836 SYNJ2BP-COX16A0A087WUM0 186 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 MYO1CO00159 1063 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 PRPSAP2O60256 369 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 RGS2P41220 211 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 CTCFP49711 727 aaPredicted RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 EIF3EP60228 445 aaKnown RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 PKDCCQ504Y2 493 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 FAM228AQ86W67 206 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 ANKRD42Q8N9B4 389 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 CMASQ8NFW8 434 aaPredicted RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 USP6NLQ92738 828 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 ARHGEF2Q92974 986 aaKnown RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 PRMT1Q99873 361 aaKnown RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 CNPY3Q9BT09 278 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 COX16Q9P0S2 106 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 UBQLN1Q9UMX0 589 aaKnown RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 GABRQQ9UN88 632 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 GMNCA6NCL1 334 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 POC1B-GALNT4F8VUJ3 575 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 RBP3P10745 1247 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 TKTP29401 623 aaKnown RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 PAXIP1Q6ZW49 1069 aaPredicted RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 BBS12Q6ZW61 710 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 TAX1BP1Q86VP1 789 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 NT5DC4Q86YG4 428 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 NKD2Q969F2 451 aaPredicted RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 MAK16Q9BXY0 300 aaKnown RBP16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 KCNK9Q9NPC2 374 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 NR2E3Q9Y5X4 410 aa16.01■□□□□ 0.15
AC009961.1-203ENST00000607836 PIRO00625 290 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 RPL22P35268 128 aaKnown RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 MMP13P45452 471 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 LMNB2Q03252 620 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 PDIA2Q13087 525 aaKnown RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 KRT81Q14533 505 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 MSS51Q4VC12 460 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 RGMBQ6NW40 437 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 CTU1Q7Z7A3 348 aaKnown RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 ZCCHC9Q8N567 271 aaKnown RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 VPS37BQ9H9H4 285 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 FAM169AQ9Y6X4 670 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 MANSC4A6NHS7 340 aaPredicted RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 BEST1O76090 585 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 STAU1O95793 577 aaKnown RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 AGTP01019 485 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 ITGAVP06756 1048 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 BASP1P80723 227 aaKnown RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 DPYSL3Q14195 570 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 RNASEH2BQ5TBB1 312 aaKnown RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 FAXCQ5TGI0 409 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 OSTM1Q86WC4 334 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 RNF169Q8NCN4 708 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 XPO6Q96QU8 1125 aaKnown RBP16■□□□□ 0.15
AC009961.1-203ENST00000607836 APBA2Q99767 749 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 SNX25Q9H3E2 840 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 TMPRSS4Q9NRS4 437 aa16■□□□□ 0.15
AC009961.1-203ENST00000607836 PTGESO14684 152 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 SDC4P31431 198 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 MLH1P40692 756 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 LILRA4P59901 499 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 SLC6A3Q01959 620 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 CAV1Q03135 178 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 NBPF20Q3BBV1 942 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 PAN2Q504Q3 1202 aaKnown RBP15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 FNBP1LQ5T0N5 605 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 GDF6Q6KF10 455 aaPredicted RBP15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 DRICH1Q6PGQ1 229 aaPredicted RBP15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 SRRM1Q8IYB3 904 aaKnown RBP15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 LRRC52Q8N7C0 313 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 APPL2Q8NEU8 664 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 FAXDC2Q96IV6 333 aa15.99■□□□□ 0.15
AC009961.1-203ENST00000607836 INTS9Q9NV88 658 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms