RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 TSC2P49815 1807 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 ARHGAP33O14559 1287 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 ADH1CP00326 375 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 CFIP05156 583 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 KRT18P05783 430 aaKnown RBP16.01■□□□□ 0.15
SSBP4-214ENST00000607020 NOP14P78316 857 aaKnown RBP16.01■□□□□ 0.15
SSBP4-214ENST00000607020 SCARA3Q6AZY7 606 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 DENND5BQ6ZUT9 1274 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 C12orf40Q86WS4 652 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 ADGRF2Q8IZF7 708 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 HMGB4Q8WW32 186 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 ADAMTS14Q8WXS8 1223 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 DUSP9Q99956 384 aaKnown RBP16.01■□□□□ 0.15
SSBP4-214ENST00000607020 FAM213AQ9BRX8 229 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 ARHGEF4Q9NR80 690 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 TBC1D14Q9P2M4 693 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 SIX4Q9UIU6 781 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 SCN1AP35498 2009 aa16.01■□□□□ 0.15
SSBP4-214ENST00000607020 ITPR1Q14643 2758 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 TCRBV21S2A2A0A5A6 115 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 GJB3O75712 270 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 LDHAP00338 332 aaKnown RBP16■□□□□ 0.15
SSBP4-214ENST00000607020 OAS1P00973 400 aaKnown RBP16■□□□□ 0.15
SSBP4-214ENST00000607020 SYPP08247 313 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 PLCG1P19174 1290 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 DDIT3P35638 169 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 USP46P62068 366 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 ZNF33AQ06730 810 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 SCAPQ12770 1279 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 RESTQ13127 1097 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 PREPLQ4J6C6 727 aaPredicted RBP16■□□□□ 0.15
SSBP4-214ENST00000607020 TRMT11Q7Z4G4 463 aaKnown RBP16■□□□□ 0.15
SSBP4-214ENST00000607020 DDX42Q86XP3 938 aaKnown RBP eCLIP16■□□□□ 0.15
SSBP4-214ENST00000607020 MINDY1Q8N5J2 469 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 KRI1Q8N9T8 703 aaKnown RBP16■□□□□ 0.15
SSBP4-214ENST00000607020 OTUB2Q96DC9 234 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 C8orf48Q96LL4 319 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 GTPBP2Q9BX10 602 aaKnown RBP16■□□□□ 0.15
SSBP4-214ENST00000607020 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 CIZ1Q9ULV3 898 aaPredicted RBP16■□□□□ 0.15
SSBP4-214ENST00000607020 KIF3AQ9Y496 699 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 CPQQ9Y646 472 aa16■□□□□ 0.15
SSBP4-214ENST00000607020 GON4LQ3T8J9 2241 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 NBEAQ8NFP9 2946 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 ATXN2Q99700 1313 aaKnown RBP15.99■□□□□ 0.15
SSBP4-214ENST00000607020 A0A1W2PQD8 194 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 E2F8A0AVK6 867 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 TRIM66O15016 1216 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 HCRTO43612 131 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 ATP2C2O75185 946 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 ADH5P11766 374 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 GARTP22102 1010 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 BDNFP23560 247 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 LMO2P25791 158 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 GRIK1P39086 918 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 RPL6Q02878 288 aaKnown RBP15.99■□□□□ 0.15
SSBP4-214ENST00000607020 TRIP6Q15654 476 aaKnown RBP15.99■□□□□ 0.15
SSBP4-214ENST00000607020 CCNI2Q6ZMN8 369 aaPredicted RBP15.99■□□□□ 0.15
SSBP4-214ENST00000607020 PDZD3Q86UT5 571 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 ETFBKMTQ8IXQ9 262 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 PGBD3Q8N328 593 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 KBTBD7Q8WVZ9 684 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 LARP4BQ92615 738 aaKnown RBP15.99■□□□□ 0.15
SSBP4-214ENST00000607020 SYT15Q9BQS2 421 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 CRTAC1Q9NQ79 661 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 FSCN3Q9NQT6 498 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 SEL1LQ9UBV2 794 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 EXOC7Q9UPT5 735 aa15.99■□□□□ 0.15
SSBP4-214ENST00000607020 WDFY3Q8IZQ1 3526 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 ZNF217O75362 1048 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 FAM163BP0C2L3 166 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 GABRG2P18507 467 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 ANXA13P27216 316 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
SSBP4-214ENST00000607020 GAD2Q05329 585 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 MYO1EQ12965 1108 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 L1TD1Q5T7N2 865 aaKnown RBP15.98■□□□□ 0.15
SSBP4-214ENST00000607020 MCTP1Q6DN14 999 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 SFR1Q86XK3 245 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 MYCBPAPQ8TBZ2 947 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 NUP205Q92621 2012 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 MYLPFQ96A32 169 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 ZNF419Q96HQ0 510 aaPredicted RBP15.98■□□□□ 0.15
SSBP4-214ENST00000607020 ACCSQ96QU6 501 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 RBAKQ9NYW8 714 aaPredicted RBP15.98■□□□□ 0.15
SSBP4-214ENST00000607020 CFAP97Q9P2B7 532 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 STARD13Q9Y3M8 1113 aa15.98■□□□□ 0.15
SSBP4-214ENST00000607020 IGHV1OR15-9A0A0B4J2B8 117 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 TBC1D3BA6NDS4 549 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 HOXC11O43248 304 aaPredicted RBP15.97■□□□□ 0.15
SSBP4-214ENST00000607020 SH3BP5O60239 455 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 WARSP23381 471 aaKnown RBP15.97■□□□□ 0.15
SSBP4-214ENST00000607020 KCNA1Q09470 495 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 LY6G5CQ5SRR4 150 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 NUDT18Q6ZVK8 323 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 GLRX5Q86SX6 157 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 SLC41A1Q8IVJ1 513 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 ZSWIM2Q8NEG5 633 aa15.97■□□□□ 0.15
SSBP4-214ENST00000607020 FAM124BQ9H5Z6 455 aaPredicted RBP15.97■□□□□ 0.15
SSBP4-214ENST00000607020 CCDC86Q9H6F5 360 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms