RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 TPGS2Q68CL5 300 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 FSTL4Q6MZW2 842 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 C1orf186Q6ZWK4 172 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 BTLAQ7Z6A9 289 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 DAW1Q8N136 415 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 CHCHD4Q8N4Q1 142 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 PDILTQ8N807 584 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 SYT2Q8N9I0 419 aaPredicted RBP13.2□□□□□ -0.3
HLA-F-230ENST00000606273 C3orf58Q8NDZ4 430 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 HNRNPLLQ8WVV9 542 aaKnown RBP13.2□□□□□ -0.3
HLA-F-230ENST00000606273 BHMTQ93088 406 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 CALML4Q96GE6 196 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 LRRC3Q9BY71 257 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
HLA-F-230ENST00000606273 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 CHMP5Q9NZZ3 219 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 EBF1Q9UH73 591 aa13.2□□□□□ -0.3
HLA-F-230ENST00000606273 RECQL4O94761 1208 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 PRKCBP05771 671 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 GATA4P43694 442 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 RAD51AP2Q09MP3 1159 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 MRPL58Q14197 206 aaKnown RBP13.19□□□□□ -0.3
HLA-F-230ENST00000606273 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 PIP4P1Q86T03 277 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 RAD54LQ92698 747 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 CCDC43Q96MW1 224 aaKnown RBP13.19□□□□□ -0.3
HLA-F-230ENST00000606273 HHIPQ96QV1 700 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 ATP6V1DQ9Y5K8 247 aa13.19□□□□□ -0.3
HLA-F-230ENST00000606273 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
HLA-F-230ENST00000606273 SLC26A4O43511 780 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 HIP1RO75146 1068 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 GBP1P32455 592 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
HLA-F-230ENST00000606273 GRSF1Q12849 480 aaKnown RBP eCLIP13.18□□□□□ -0.3
HLA-F-230ENST00000606273 TMEM132AQ24JP5 1023 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 STXBP5Q5T5C0 1151 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 PMS2CLQ68D20 193 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 RASSF8Q8NHQ8 419 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 PPP1R10Q96QC0 940 aaKnown RBP13.18□□□□□ -0.3
HLA-F-230ENST00000606273 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 FBRSL1Q9HCM7 1045 aaKnown RBP13.18□□□□□ -0.3
HLA-F-230ENST00000606273 FBXL5Q9UKA1 691 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 MAFFQ9ULX9 164 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 INVSQ9Y283 1065 aa13.18□□□□□ -0.3
HLA-F-230ENST00000606273 FAM229AH3BQW9 127 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 H7C4K7 107 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 TRDMT1O14717 391 aaKnown RBP13.17□□□□□ -0.3
HLA-F-230ENST00000606273 C19orf57Q0VDD7 668 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 LMAN2Q12907 356 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 SEMA3BQ13214 749 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 CRTC2Q53ET0 693 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-230ENST00000606273 RRAGBQ5VZM2 374 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 SYT13Q7L8C5 426 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 GPBP1Q86WP2 473 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 LARP4BQ92615 738 aaKnown RBP13.17□□□□□ -0.3
HLA-F-230ENST00000606273 CHFRQ96EP1 664 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 LRIG1Q96JA1 1093 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 CALR3Q96L12 384 aaKnown RBP13.17□□□□□ -0.3
HLA-F-230ENST00000606273 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 UROC1Q96N76 676 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-230ENST00000606273 FZD8Q9H461 694 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 OBP2AQ9NY56 170 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 CCDC39Q9UFE4 941 aa13.17□□□□□ -0.3
HLA-F-230ENST00000606273 AFF4Q9UHB7 1163 aaKnown RBP13.17□□□□□ -0.3
HLA-F-230ENST00000606273 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 MYMKA6NI61 221 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 SYN3O14994 580 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 APBB3O95704 486 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 EGFP01133 1207 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 EDN1P05305 212 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 PFKFB1P16118 471 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 GUCY2CP25092 1073 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 FAM193AP78312 1265 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 DPYDQ12882 1025 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 HIF1AQ16665 826 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 GLRA4Q5JXX5 417 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 C11orf74Q86VG3 221 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 TMC8Q8IU68 726 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 BPIFB1Q8TDL5 484 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 DHX58Q96C10 678 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 KIFC3Q9BVG8 833 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 CCDC86Q9H6F5 360 aaKnown RBP13.16□□□□□ -0.3
HLA-F-230ENST00000606273 GOLGA2P5Q9HBQ8 144 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
HLA-F-230ENST00000606273 EVLQ9UI08 416 aaPredicted RBP13.16□□□□□ -0.3
HLA-F-230ENST00000606273 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 USP20Q9Y2K6 914 aa13.16□□□□□ -0.3
HLA-F-230ENST00000606273 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms