RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ZNF840PA6NDX5 716 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 SOBPA7XYQ1 873 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 H0Y858 1186 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 GALR2O43603 387 aaPredicted RBP15.26■□□□□ 0.03
TUBE1-208ENST00000604743 AFPP02771 609 aaKnown RBP15.26■□□□□ 0.03
TUBE1-208ENST00000604743 SOX9P48436 509 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 RAD23BP54727 409 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 TNK2Q07912 1038 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 TCF15Q12870 199 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 DPCR1Q3MIW9 517 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 TRIM68Q6AZZ1 485 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 CC2D1AQ6P1N0 951 aaPredicted RBP15.26■□□□□ 0.03
TUBE1-208ENST00000604743 CLEC20AQ6ZU45 233 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 TRIM59Q8IWR1 403 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 TTC39CQ8N584 583 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 DTWD2Q8NBA8 298 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 SLC4A11Q8NBS3 891 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 GPT2Q8TD30 523 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 NT5C1BQ96P26 610 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 MED15Q96RN5 788 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 DDX23Q9BUQ8 820 aaKnown RBP15.26■□□□□ 0.03
TUBE1-208ENST00000604743 KIF9Q9HAQ2 790 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 LTB4R2Q9NPC1 389 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 GKN1Q9NS71 199 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 GTSE1Q9NYZ3 720 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 GCNT4Q9P109 453 aa15.26■□□□□ 0.03
TUBE1-208ENST00000604743 ARIH1Q9Y4X5 557 aaPredicted RBP15.26■□□□□ 0.03
TUBE1-208ENST00000604743 ATG2BQ96BY7 2078 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 ARNTLO00327 626 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 MAN2B1O00754 1011 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 TNFRSF10BO14763 440 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 TARSP26639 723 aaKnown RBP15.25■□□□□ 0.03
TUBE1-208ENST00000604743 PPP3CCP48454 512 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 PTPN5P54829 565 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 YWHAEP62258 255 aaKnown RBP15.25■□□□□ 0.03
TUBE1-208ENST00000604743 PLCB2Q00722 1185 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 CCDC105Q8IYK2 499 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 PPM1KQ8N3J5 372 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 RIN3Q8TB24 985 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 FAM3CQ92520 227 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 CNOT6LQ96LI5 555 aaKnown RBP15.25■□□□□ 0.03
TUBE1-208ENST00000604743 RNF38Q9H0F5 515 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 EBF3Q9H4W6 596 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 CSNK1G1Q9HCP0 422 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 TRPV5Q9NQA5 729 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 GMIPQ9P107 970 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 MRPS17Q9Y2R5 130 aaKnown RBP15.25■□□□□ 0.03
TUBE1-208ENST00000604743 CACNA1IQ9P0X4 2223 aa15.25■□□□□ 0.03
TUBE1-208ENST00000604743 MBL2P11226 248 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-208ENST00000604743 GLULP15104 373 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 CD19P15391 556 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 TBXAS1P24557 533 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-208ENST00000604743 PLA2G5P39877 138 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 MTIF2P46199 727 aaKnown RBP15.24■□□□□ 0.03
TUBE1-208ENST00000604743 PDE6CP51160 858 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 NUBP1P53384 320 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 MARSP56192 900 aaKnown RBP15.24■□□□□ 0.03
TUBE1-208ENST00000604743 NHLH1Q02575 133 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 ZNF268Q14587 947 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-208ENST00000604743 MTF1Q14872 753 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 RRAGAQ7L523 313 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 GPRIN1Q7Z2K8 1008 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 EHBP1Q8NDI1 1231 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 PDZD8Q8NEN9 1154 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 SH3RF2Q8TEC5 729 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 ATOH1Q92858 354 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-208ENST00000604743 KAT5Q92993 513 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 FAM86C1Q9NVL1 165 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 SMPD4Q9NXE4 827 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 PCDHB4Q9Y5E5 795 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 MYOFQ9NZM1 2061 aa15.24■□□□□ 0.03
TUBE1-208ENST00000604743 SHISA7A6NL88 538 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 SPECC1L-ADORA2AF8WAN1 911 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 PMM2O15305 246 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 NCAM2O15394 837 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 P4HA2O15460 535 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 ARSAP15289 507 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 ACO1P21399 889 aaKnown RBP15.23■□□□□ 0.03
TUBE1-208ENST00000604743 ZNF77Q15935 545 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 ITPRIPL2Q3MIP1 535 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 TMEM270Q6UE05 265 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 ARHGEF19Q8IW93 802 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 LMO3Q8TAP4 145 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 OVCA2Q8WZ82 227 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 NELL2Q99435 816 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 FAM83CQ9BQN1 747 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 CRACR2AQ9BSW2 395 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 DUSP16Q9BY84 665 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 FBXO44Q9H4M3 255 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 C8orf33Q9H7E9 229 aaPredicted RBP15.23■□□□□ 0.03
TUBE1-208ENST00000604743 COMMD8Q9NX08 183 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 DUS2Q9NX74 493 aaKnown RBP15.23■□□□□ 0.03
TUBE1-208ENST00000604743 DLGAP2Q9P1A6 1054 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 DACH1Q9UI36 760 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 ARHGAP26Q9UNA1 814 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 CPQQ9Y646 472 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 WNT6Q9Y6F9 365 aa15.23■□□□□ 0.03
TUBE1-208ENST00000604743 HHLA1C9JL84 531 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms