RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 GHRP10912 638 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KRT4P19013 534 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 IBSPP21815 317 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GABRB2P47870 512 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ZNF143P52747 638 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GPRC5AQ8NFJ5 357 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FBF1Q8TES7 1133 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 UBN1Q9NPG3 1134 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SNTG2Q9NY99 539 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 XPO7Q9UIA9 1087 aaKnown RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CHMP2BQ9UQN3 213 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 HEY1Q9Y5J3 304 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CITO14578 2027 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 DICER1Q9UPY3 1922 aaKnown RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 A0A1B0GUA9 196 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MCF2LO15068 1137 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MAGEB2O15479 319 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SNAI1O95863 264 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FGFR1P11362 822 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TFE3P19532 575 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GPD1P21695 349 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 RBP5P82980 135 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 XRCC4Q13426 336 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 DPYSL3Q14195 570 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GOLGA7BQ2TAP0 167 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ZNF792Q3KQV3 632 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 DARS2Q6PI48 645 aaKnown RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PPP1R21Q6ZMI0 780 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CCDC63Q8NA47 563 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PPTC7Q8NI37 304 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 P3H4Q92791 437 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C18orf25Q96B23 403 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SMC6Q96SB8 1091 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NT5C1AQ9BXI3 368 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MIS12Q9H081 205 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CYP3A43Q9HB55 503 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ASNSD1Q9NWL6 643 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TRIM33Q9UPN9 1127 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 EFR3BQ9Y2G0 817 aa12.34□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 WDR91A4D1P6 747 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 NPTXRO95502 500 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 P4HA1P13674 534 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 ATICP31939 592 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 ARL4CP56559 192 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 IL9RQ01113 521 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 SNAPC2Q13487 334 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 GRIK4Q16099 956 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 CA9Q16790 459 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 FAXCQ5TGI0 409 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PNMA8AQ86V59 439 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 TTC30AQ86WT1 665 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 SUGP1Q8IWZ8 645 aaKnown RBP12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 KIF2BQ8N4N8 673 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 DENND1AQ8TEH3 1009 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 SGSM3Q96HU1 749 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 CNPY3Q9BT09 278 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 ACTL7BQ9Y614 415 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 ADCY6O43306 1168 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 GABBR2O75899 941 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 EPHX2P34913 555 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 KCNJ2P63252 427 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 CCDC14Q49A88 953 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 CEP128Q6ZU80 1094 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 FAM228AQ86W67 206 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PARP9Q8IXQ6 854 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PALM2Q8IXS6 379 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 RIBC1Q8N443 379 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 C7orf31Q8N865 590 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 APOL6Q9BWW8 343 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 VRTNQ9H8Y1 702 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 H7C0C1 242 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PDHXO00330 501 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PRPSAP2O60256 369 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 DNAJC8O75937 253 aaPredicted RBP12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 YBX3P16989 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 SMPD1P17405 629 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 IL4RP24394 825 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 ATP5OP48047 213 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 ATXN1P54253 815 aaKnown RBP12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 GEMIN4P57678 1058 aaKnown RBP12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 INCA1Q0VD86 236 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 MTFR1Q15390 333 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PPP6R3Q5H9R7 873 aaPredicted RBP12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 TDRPQ86YL5 185 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 CCDC125Q86Z20 511 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PAFAH2Q99487 392 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 DPEP3Q9H4B8 488 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 RSAD1Q9HA92 442 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 ALG13Q9NP73 1137 aaKnown RBP12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PSMC3IPQ9P2W1 217 aaPredicted RBP12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PRKAG3Q9UGI9 489 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 GJD2Q9UKL4 321 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 ARL2BPQ9Y2Y0 163 aa12.32□□□□□ -0.44
HMGN3-AS1-201ENST00000604516 PDGFRBP09619 1106 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms