RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 FAN1Q9Y2M0 1017 aa12.9□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 MYBPHLA2RUH7 354 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 H7C4K7 107 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TULP2O00295 520 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NRP1O14786 923 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 HCRTO43612 131 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 B4GALT3O60512 393 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PHF2O75151 1096 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ATP2C2O75185 946 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TADA2AO75478 443 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 AP1G2O75843 785 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 GABBR2O75899 941 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 AMHP03971 560 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ITGB1P05556 798 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PYGMP11217 842 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PDGFRAP16234 1089 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ACAT1P24752 427 aaKnown RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SDC4P31431 198 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MAGEA11P43364 429 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MARCKSL1P49006 195 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 AIF1P55008 147 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TAS2R40P59535 323 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MRPS5P82675 430 aaKnown RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TAZQ16635 292 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TCTN1Q2MV58 587 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZNF280DQ6N043 979 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 VSTM1Q6UX27 236 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 STRADAQ7RTN6 431 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PSTKQ8IV42 348 aaKnown RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CMTR2Q8IYT2 770 aaKnown RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CENPIQ92674 756 aaPredicted RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 KHSRPQ92945 711 aaKnown RBP eCLIP12.89□□□□□ -0.354e-7■■□□□ 13.3
NEDD8-MDP1-203ENST00000604306 TOP1MTQ969P6 601 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MYLPFQ96A32 169 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZNF689Q96CS4 500 aaPredicted RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 C11orf84Q9BUA3 381 aaPredicted RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FAM129AQ9BZQ8 928 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PRDM16Q9HAZ2 1276 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RC3H2Q9HBD1 1191 aaKnown RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LRRC4Q9HBW1 653 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MARCH5Q9NX47 278 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PCYOX1Q9UHG3 505 aa12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 V9GYY5 206 aaPredicted RBP12.89□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FAM187AA6NFU0 413 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BHMG1C9JSJ3 638 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 F8VP50 259 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MDM4O15151 490 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ATP8B1O43520 1251 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 GALTP07902 379 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 GBP1P32455 592 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 MATKP42679 507 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RGS7P49802 495 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ADCY1Q08828 1119 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 KLF1Q13351 362 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NAA30Q147X3 362 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BOLA3Q53S33 107 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TFDP3Q5H9I0 405 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PM20D1Q6GTS8 502 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FUT10Q6P4F1 479 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DRICH1Q6PGQ1 229 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SYDE1Q6ZW31 735 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ANKS3Q6ZW76 656 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BNIPLQ7Z465 357 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PHLDB2Q86SQ0 1253 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RNF168Q8IYW5 571 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SIX6OS1Q8N1H7 587 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 CMASQ8NFW8 434 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 OR10T2Q8NGX3 314 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RXFP2Q8WXD0 754 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SEC14L1Q92503 715 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NT5C3BQ969T7 300 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 VWCEQ96DN2 955 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SLC2A13Q96QE2 648 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SMOQ99835 787 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 LRRC19Q9H756 370 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 COMMD8Q9NX08 183 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 EHD2Q9NZN4 543 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DNAJB4Q9UDY4 337 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FEZ2Q9UHY8 353 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 STAP1Q9ULZ2 295 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 BRCA2P51587 3418 aa12.88□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 HHLA1C9JL84 531 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TRIM66O15016 1216 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TBC1D4O60343 1298 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ENDOD1O94919 500 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 TJP3O95049 919 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 GJB6O95452 261 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 RAG1P15918 1043 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 NOS2P35228 1153 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 FLT3P36888 993 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 SLC11A1P49279 550 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 DAOAP59103 153 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 YWHAZP63104 245 aaKnown RBP12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ADIGQ0VDE8 80 aa12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 ZNF211Q13398 564 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-MDP1-203ENST00000604306 PDK2Q15119 407 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms