RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 TRPC7Q9HCX4 862 aa16.92■□□□□ 0.3
PPFIA3-213ENST00000602905 TMEM30AQ9NV96 361 aa16.92■□□□□ 0.3
PPFIA3-213ENST00000602905 NUMBLQ9Y6R0 609 aa16.92■□□□□ 0.3
PPFIA3-213ENST00000602905 TRAV19A0A0A6YYK7 116 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 M0QYV0 167 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 O00370 1275 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 TNFRSF10BO14763 440 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 THAP12O43422 761 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 SETSIPP0DME0 302 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 BRD2P25440 801 aaKnown RBP16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 GNA15P30679 374 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 ZNF132P52740 706 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 SYCP1Q15431 976 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 FAM78AQ5JUQ0 283 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 PARM1Q6UWI2 310 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 LCLAT1Q6UWP7 414 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 MON1AQ86VX9 555 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 MAB21L3Q8N8X9 362 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 SCAMP5Q8TAC9 235 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 FGF14Q92915 247 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 ELSPBP1Q96BH3 223 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 ZSWIM3Q96MP5 696 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 ERGIC2Q96RQ1 377 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 LRRC4Q9HBW1 653 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 FAM207AQ9NSI2 230 aaPredicted RBP16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 FHOD1Q9Y613 1164 aa16.91■□□□□ 0.3
PPFIA3-213ENST00000602905 BDP1A6H8Y1 2624 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 XPO1O14980 1071 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 ECI2O75521 394 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 PFKLP17858 780 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 WEE1P30291 646 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 DRAP1Q14919 205 aaPredicted RBP16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 STXBP5Q5T5C0 1151 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 TXNDC8Q6A555 127 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 TMEM150AQ86TG1 271 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 ARID3BQ8IVW6 561 aaPredicted RBP16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 CMTM8Q8IZV2 173 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 SLC44A3Q8N4M1 653 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 UBA3Q8TBC4 463 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 RSAD2Q8WXG1 361 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 TFAP2BQ92481 460 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 SPAG5Q96R06 1193 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 KXD1Q9BQD3 176 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 STK33Q9BYT3 514 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 TRPV4Q9HBA0 871 aa16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 TLR8Q9NR97 1041 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-213ENST00000602905 VCANP13611 3396 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 FOXN3O00409 490 aaPredicted RBP16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 NRG2O14511 850 aaPredicted RBP16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 CYP26A1O43174 497 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 TADA3O75528 432 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 CKMP06732 381 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 USP17L7P0C7H9 530 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 POLR2FP61218 127 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 PDE4CQ08493 712 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 TANGO2Q6ICL3 276 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 APTXQ7Z2E3 356 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 PIGZQ86VD9 579 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 TTC30AQ86WT1 665 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 YAF2Q8IY57 180 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 ST13P5Q8NFI4 369 aaPredicted RBP16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 DEPDC1BQ8WUY9 529 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 ZNF606Q8WXB4 792 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 SLC46A2Q9BY10 475 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 RTN4Q9NQC3 1192 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 IL37Q9NZH6 218 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 SCML2Q9UQR0 700 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 SIK3Q9Y2K2 1263 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 NCANO14594 1321 aa16.89■□□□□ 0.29
PPFIA3-213ENST00000602905 ZNF840PA6NDX5 716 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 HHLA1C9JL84 531 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 PI4K2BG5E9Z4 385 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 TPM3P06753 285 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 SRFP11831 508 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 HDCP19113 662 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 KRT9P35527 623 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 PLA2G4AP47712 749 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 KLK7P49862 253 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 KIF11P52732 1056 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 ZXDAP98168 799 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 FANCCQ00597 558 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 DPY19L2P1Q6NXN4 242 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 CACNA2D4Q7Z3S7 1137 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 FAM71AQ8IYT1 594 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 SIX6OS1Q8N1H7 587 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 CELF5Q8N6W0 485 aaKnown RBP16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 EDAQ92838 391 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 NAA15Q9BXJ9 866 aaKnown RBP16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 NACA2Q9H009 215 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 GANQ9H2C0 597 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 KIF9Q9HAQ2 790 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 OBP2AQ9NY56 170 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 GMIPQ9P107 970 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 CHORDC1Q9UHD1 332 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 AJAP1Q9UKB5 411 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 DUSP12Q9UNI6 340 aa16.88■□□□□ 0.29
PPFIA3-213ENST00000602905 CEP83Q9Y592 693 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms