RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 DCDC2BA2VCK2 349 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 DPPA5A6NC42 116 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 NCF1BA6NI72 391 aaPredicted RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 NCF1CA8MVU1 366 aaPredicted RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 NT5C1B-RDH14C9J2C7 533 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 F8W8V4 182 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 DAPK3O43293 454 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PRAMEF12O95522 483 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 MLYCDO95822 493 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 POLR2MP0CAP2 368 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 GHRP10912 638 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 OSMP13725 252 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 RAG1P15918 1043 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ALOX12P18054 663 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 IL11P20809 199 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 MC4RP32245 332 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 DHPSP49366 369 aaPredicted RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CCNG1P51959 295 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 UBE2HP62256 183 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 PWP1Q13610 501 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CMPK2Q5EBM0 449 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZMYM1Q5SVZ6 1142 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TRAT1Q6PIZ9 186 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF365Q70YC5 407 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TTC7BQ86TV6 843 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 UNC45BQ8IWX7 931 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZFPM1Q8IX07 1006 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 GIMAP5Q96F15 307 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 STAMBPL1Q96FJ0 436 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ATP6V1G3Q96LB4 118 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CCDC74BQ96LY2 380 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CATSPER2Q96P56 530 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SLC4A9Q96Q91 983 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CDK5RAP1Q96SZ6 601 aaKnown RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TCF12Q99081 682 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CNPPD1Q9BV87 410 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 KAT14Q9H8E8 782 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 NOD2Q9HC29 1040 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 OBP2BQ9NPH6 170 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SNTG1Q9NSN8 517 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 ZBTB40Q9NUA8 1239 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TTC7AQ9ULT0 858 aaPredicted RBP5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 CLEC4AQ9UMR7 237 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TRAF6Q9Y4K3 522 aa5.27□□□□□ -1.57
SPTBN1-206ENST00000602898 TTC21BQ7Z4L5 1316 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TCHHQ07283 1943 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CTAGE15A4D2H0 777 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 URADA6NGE7 173 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 A8MV72 311 aaPredicted RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 BECN2A8MW95 431 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CHURC1-FNTBB4DL54 471 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 N4BP3O15049 544 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 RRP8O43159 456 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 SPINT1O43278 529 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 ANP32DO95626 131 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 POP4O95707 220 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 KRT14P02533 472 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 DLDP09622 509 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CTAGE8P0CG41 777 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 SNRPBP14678 240 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TARSP26639 723 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 MSH2P43246 934 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PLS1Q14651 629 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 VEPH1Q14D04 833 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 MTFR1Q15390 333 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 ADIPOQQ15848 244 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 GRIK5Q16478 980 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CRY1Q16526 586 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 MCMDC2Q4G0Z9 681 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 GKAP1Q5VSY0 366 aaPredicted RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TBC1D9BQ66K14 1250 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 HHIPL2Q6UWX4 724 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 RIPOR1Q6ZS17 1223 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 DHX32Q7L7V1 743 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CTAGE6Q86UF2 777 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 SLC22A9Q8IVM8 553 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CTAGE4Q8IX94 777 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 ARHGAP18Q8N392 663 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 WDR60Q8WVS4 1066 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PPP1R14AQ96A00 147 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PKP4Q99569 1192 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 GAKO14976 1311 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 ATP8B3O60423 1300 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CAPN8A6NHC0 703 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 MAPK13O15264 365 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TP73O15350 636 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 RNF113AO15541 343 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TSPAN3O60637 253 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 LRG1P02750 347 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PRR35P0CG20 571 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 POLR2EP19388 210 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 ETV3P41162 512 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 STAT6P42226 847 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CCR5P51681 352 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 RNASE9P60153 205 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PSMA6P60900 246 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 BASP1P80723 227 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PRR20EP86478 221 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms