RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 ZNF699Q32M78 642 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 PPM1JQ5JR12 505 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 CAMKK1Q8N5S9 505 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 B3GALNT2Q8NCR0 500 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 PLEKHO2Q8TD55 490 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 FBXO32Q969P5 355 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 SNX21Q969T3 373 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 SYAP1Q96A49 352 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 C8orf48Q96LL4 319 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 SLITRK1Q96PX8 696 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 ELOVL4Q9GZR5 314 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 EXOC1Q9NV70 894 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 TMEM30AQ9NV96 361 aa18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 CHORDC1Q9UHD1 332 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 CIZ1Q9ULV3 898 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-223ENST00000600552 HELZP42694 1942 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 MYOFQ9NZM1 2061 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 PVALEFA0A1B0GWK0 134 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 APBB3O95704 486 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 YWHAQP27348 245 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 GBP1P32455 592 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 SLC6A11P48066 632 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 EHHADHQ08426 723 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 ZNF667Q5HYK9 610 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 IL31Q6EBC2 164 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 TSTD1Q8NFU3 115 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 ACDQ96AP0 544 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 CNTNAP3BQ96NU0 1288 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 KCNK16Q96T55 309 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 CNTNAP3Q9BZ76 1288 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 TPSD1Q9BZJ3 242 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 GZF1Q9H116 711 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 CFAP45Q9UL16 551 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 EML5Q05BV3 1969 aa18.7■□□□□ 0.58
SHKBP1-223ENST00000600552 LRRIQ3A6PVS8 624 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 CYP17A1P05093 508 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 ATICP31939 592 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 OPRD1P41143 372 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 NOP14P78316 857 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 STK4Q13043 487 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 NCOA4Q13772 614 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 BMT2Q1RMZ1 405 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 SYT13Q7L8C5 426 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 NUP93Q8N1F7 819 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 PAGE5Q96GU1 130 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 TTLL2Q9BWV7 592 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 XYLT2Q9H1B5 865 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 CGNQ9P2M7 1197 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 DNAH14Q0VDD8 3507 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 ATP8B3O60423 1300 aa18.69■□□□□ 0.58
SHKBP1-223ENST00000600552 MYH10P35580 1976 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 CCDC163A0A0D9SF12 145 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 A0A1B0GVL5 298 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 EPN2O95208 641 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 IRF1P10914 325 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 PPP3CCP48454 512 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 SLC7A9P82251 487 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 CREB5Q02930 508 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 KDSRQ06136 332 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 DHCR24Q15392 516 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 PLK5Q496M5 336 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 KMT5BQ4FZB7 885 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 CEP135Q66GS9 1140 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 ACOT1Q86TX2 421 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 SCAMP5Q8TAC9 235 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 GOLGA5Q8TBA6 731 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 CHAMP1Q96JM3 812 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 CEP295NLQ96MC4 621 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 RXFP3Q9NSD7 469 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 MYO16Q9Y6X6 1858 aa18.68■□□□□ 0.58
SHKBP1-223ENST00000600552 K7EQS6 105 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 SLC9A3R1O14745 358 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 KLRC4O43908 158 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 RTN3O95197 1032 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 FAM163BP0C2L3 166 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 SLFN14P0C7P3 912 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 DLG4P78352 724 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 ELF2Q15723 593 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 TCEAL6Q6IPX3 200 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 ANO7Q6IWH7 933 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 FAM35AQ86V20 835 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 SFTPA1Q8IWL2 248 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 C12orf56Q8IXR9 622 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 ADGRG2Q8IZP9 1017 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 KIAA0895Q8NCT3 520 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 PARD3BQ8TEW8 1205 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 USP33Q8TEY7 942 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 TCEAL3Q969E4 200 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 JAKMIP2Q96AA8 810 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 LOXL4Q96JB6 756 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 NACA2Q9H009 215 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 SDCBP2Q9H190 292 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 DUSP15Q9H1R2 295 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 ZDHHC4Q9NPG8 344 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 RCOR1Q9UKL0 485 aa18.67■□□□□ 0.58
SHKBP1-223ENST00000600552 ACTN4O43707 911 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 FOXD2O60548 495 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 AP1G2O75843 785 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 RHOBTB1O94844 696 aa18.66■□□□□ 0.58
SHKBP1-223ENST00000600552 VNN1O95497 513 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms