RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 LRRC4Q9HBW1 653 aa12.96□□□□□ -0.33
TGFB1-204ENST00000600196 SCML2Q9UQR0 700 aa12.96□□□□□ -0.33
TGFB1-204ENST00000600196 MYO7AQ13402 2215 aa12.96□□□□□ -0.34
TGFB1-204ENST00000600196 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 EIF3CLB5ME19 914 aaKnown RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 CLDN5O00501 218 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 PER2O15055 1255 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 AKR1B10O60218 316 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 IPO7O95373 1038 aaKnown RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 MMEP08473 750 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 PNMA6AP0CW24 399 aaPredicted RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 EPCAMP16422 314 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 DDX6P26196 483 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■□□□ 12.6
TGFB1-204ENST00000600196 WEE1P30291 646 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 NSFP46459 744 aaKnown RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 TUBP50607 506 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 MAP3K7CLP57077 242 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 TWF1Q12792 350 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 PDCLQ13371 301 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 ORC1Q13415 861 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 TAF12Q16514 161 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 E4F1Q66K89 784 aaPredicted RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 CES5AQ6NT32 575 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 DNAJB7Q7Z6W7 309 aaPredicted RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 GPR149Q86SP6 731 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 TADA2BQ86TJ2 420 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 RBM23Q86U06 439 aaKnown RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 LRRC8AQ8IWT6 810 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 KIAA1958Q8N8K9 716 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 C18orf8Q96DM3 657 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 PPP1R13BQ96KQ4 1090 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 GUCD1Q96NT3 240 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 SLITRK1Q96PX8 696 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 KCNK16Q96T55 309 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 EIF3CQ99613 913 aaKnown RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 ADAM7Q9H2U9 754 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 CRISPLD1Q9H336 500 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 ADAMTS1Q9UHI8 967 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 ZFP37Q9Y6Q3 630 aaPredicted RBP12.95□□□□□ -0.34
TGFB1-204ENST00000600196 LAMA3Q16787 3333 aa12.95□□□□□ -0.34
TGFB1-204ENST00000600196 PTPRDP23468 1912 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 CCDC195A0A1B0GUA6 201 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 SLC38A8A6NNN8 435 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 DDX3XO00571 662 aaKnown RBP eCLIP12.94□□□□□ -0.34
TGFB1-204ENST00000600196 ARHGAP6O43182 974 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 ZDHHC11BP0C7U3 371 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 SKILP12757 684 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 FOSL2P15408 326 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 HMGA1P17096 107 aaKnown RBP12.94□□□□□ -0.34
TGFB1-204ENST00000600196 ATF6P18850 670 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 YWHAQP27348 245 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 CDC25CP30307 473 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 EIF4A3P38919 411 aaKnown RBP12.94□□□□□ -0.34
TGFB1-204ENST00000600196 MTHFRP42898 656 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 KRT83P78385 493 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 SPA17Q15506 151 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 EFHC1Q5JVL4 640 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 ATAT1Q5SQI0 421 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 CYP4A22Q5TCH4 519 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 PMF1Q6P1K2 205 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 DENND1BQ6P3S1 775 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 ALKBH5Q6P6C2 394 aaKnown RBP12.94□□□□□ -0.34
TGFB1-204ENST00000600196 KLHDC10Q6PID8 442 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 SCN4BQ8IWT1 228 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 SIX6OS1Q8N1H7 587 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 SPC24Q8NBT2 197 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 UBA3Q8TBC4 463 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 RIPOR3Q96MK2 946 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 ACP6Q9NPH0 428 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 RRN3Q9NYV6 651 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 CLIC5Q9NZA1 410 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 NAGPAQ9UK23 515 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 NENFQ9UMX5 172 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
TGFB1-204ENST00000600196 EPN1Q9Y6I3 576 aaPredicted RBP12.94□□□□□ -0.34
TGFB1-204ENST00000600196 PRRC2BQ5JSZ5 2229 aaKnown RBP12.94□□□□□ -0.34
TGFB1-204ENST00000600196 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
TGFB1-204ENST00000600196 ANKRD62A6NC57 917 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 BEST1O76090 585 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 GLP2RO95838 553 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 ZBED1O96006 694 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 SLC5A3P53794 718 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 MTA1Q13330 715 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 TCEAL1Q15170 157 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 DDR2Q16832 855 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 TAF3Q5VWG9 929 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 TOGARAM2Q6ZUX3 1019 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 STKLD1Q8NE28 680 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 OLIG1Q8TAK6 271 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 GOLGA1Q92805 767 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 ZNF707Q96C28 371 aaPredicted RBP12.93□□□□□ -0.34
TGFB1-204ENST00000600196 MSLNLQ96KJ4 702 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 PCDHB18PQ96TA0 734 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 NCAPGQ9BPX3 1015 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 LPIN3Q9BQK8 851 aa12.93□□□□□ -0.34
TGFB1-204ENST00000600196 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms