RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SLC47A2Q86VL8 602 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 ZDHHC14Q8IZN3 488 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 WDTC1Q8N5D0 677 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 NEK11Q8NG66 645 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 ADAMTS19Q8TE59 1207 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 ING5Q8WYH8 240 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 MCRS1Q96EZ8 462 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 XPO4Q9C0E2 1151 aaKnown RBP14.53□□□□□ -0.08
VRK3-219ENST00000600137 CYTH4Q9UIA0 394 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 MAGED2Q9UNF1 606 aaPredicted RBP14.53□□□□□ -0.08
VRK3-219ENST00000600137 ANXA13P27216 316 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 GNA15P30679 374 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 USP8P40818 1118 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 BCAT1P54687 386 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 TAF10Q12962 218 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 STILQ15468 1287 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 MEA1Q16626 185 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 PMF1Q6P1K2 205 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 DENND1BQ6P3S1 775 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 BHLHA9Q7RTU4 235 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 OLIG1Q8TAK6 271 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 SLC46A2Q9BY10 475 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 DNAI2Q9GZS0 605 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 COMMD8Q9NX08 183 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 GDE1Q9NZC3 331 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 PCDHGC3Q9UN70 934 aa14.52□□□□□ -0.09
VRK3-219ENST00000600137 NCANO14594 1321 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 ZNF840PA6NDX5 716 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 ANHXE9PGG2 379 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 XPO1O14980 1071 aaKnown RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 RTN3O95197 1032 aaPredicted RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 FGF19O95750 216 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 CYP11B1P15538 503 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 TRIM21P19474 475 aaKnown RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 FCARP24071 287 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 YWHAQP27348 245 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 GBP2P32456 591 aaPredicted RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 SOX5P35711 763 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 PLA2G4AP47712 749 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 CYP4F8P98187 520 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 BST2Q10589 180 aaKnown RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 FIGNQ5HY92 759 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 SNX30Q5VWJ9 437 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 IRF2BP2Q7Z5L9 587 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 NOP9Q86U38 636 aaKnown RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 GJD3Q8N144 294 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 ST13P5Q8NFI4 369 aaPredicted RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 KCTD13Q8WZ19 329 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 SLC22A12Q96S37 553 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 RPP25Q9BUL9 199 aaKnown RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 ATXN3LQ9H3M9 355 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 LIMD1Q9UGP4 676 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 CHORDC1Q9UHD1 332 aaPredicted RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 NOCTQ9UK39 431 aaKnown RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 NR2E1Q9Y466 385 aa14.51□□□□□ -0.09
VRK3-219ENST00000600137 ZFP37Q9Y6Q3 630 aaPredicted RBP14.51□□□□□ -0.09
VRK3-219ENST00000600137 THAP12O43422 761 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 GFPT2O94808 682 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 SETSIPP0DME0 302 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 CHRNB2P17787 502 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 WEE1P30291 646 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 CDC25CP30307 473 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 PTK2Q05397 1052 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 HTR4Q13639 388 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 TAF12Q16514 161 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 FAM78AQ5JUQ0 283 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 E4F1Q66K89 784 aaPredicted RBP14.5□□□□□ -0.09
VRK3-219ENST00000600137 TXNDC8Q6A555 127 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 PM20D1Q6GTS8 502 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 SARM1Q6SZW1 724 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 PARM1Q6UWI2 310 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 SCD5Q86SK9 330 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 MON1AQ86VX9 555 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 TDRD5Q8NAT2 981 aaKnown RBP14.5□□□□□ -0.09
VRK3-219ENST00000600137 EPS8L1Q8TE68 723 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 FGF14Q92915 247 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 KHSRPQ92945 711 aaKnown RBP eCLIP14.5□□□□□ -0.09
VRK3-219ENST00000600137 SECISBP2LQ93073 1101 aaKnown RBP14.5□□□□□ -0.09
VRK3-219ENST00000600137 ACSF2Q96CM8 615 aaPredicted RBP14.5□□□□□ -0.09
VRK3-219ENST00000600137 RSPRY1Q96DX4 576 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 PCMTD1Q96MG8 357 aaPredicted RBP14.5□□□□□ -0.09
VRK3-219ENST00000600137 ASB16Q96NS5 453 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 LRRC3BQ96PB8 259 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 UHRF1Q96T88 793 aaPredicted RBP14.5□□□□□ -0.09
VRK3-219ENST00000600137 EDEM3Q9BZQ6 932 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 TASP1Q9H6P5 420 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 NMUR1Q9HB89 426 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 TRPV4Q9HBA0 871 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 OSER1Q9NX31 292 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 UXTQ9UBK9 157 aaPredicted RBP14.5□□□□□ -0.09
VRK3-219ENST00000600137 HESX1Q9UBX0 185 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 SCML2Q9UQR0 700 aa14.5□□□□□ -0.09
VRK3-219ENST00000600137 C2orf78A6NCI8 922 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 SOBPA7XYQ1 873 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 M0QYV0 167 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 STAT1P42224 750 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 BPIFB4P59827 614 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 ZXDBP98169 803 aa14.49□□□□□ -0.09
VRK3-219ENST00000600137 GPR158Q5T848 1215 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms