RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 PROS1P07225 676 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 DLATP10515 647 aaKnown RBP18.3■□□□□ 0.52
SMG9-210ENST00000600097 PTPN1P18031 435 aaKnown RBP18.3■□□□□ 0.52
SMG9-210ENST00000600097 TNNI1P19237 187 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 DHPSP49366 369 aaPredicted RBP18.3■□□□□ 0.52
SMG9-210ENST00000600097 TNNC1P63316 161 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 AMPD3Q01432 767 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 TAF10Q12962 218 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 GLIS3Q8NEA6 775 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 OLIG1Q8TAK6 271 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 WHAMMQ8TF30 809 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 SPACA7Q96KW9 195 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 CUEDC2Q9H467 287 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 ZSCAN16Q9H4T2 348 aaPredicted RBP18.3■□□□□ 0.52
SMG9-210ENST00000600097 POLMQ9NP87 494 aaPredicted RBP18.3■□□□□ 0.52
SMG9-210ENST00000600097 KBTBD4Q9NVX7 518 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 SMPD4Q9NXE4 827 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 CFAP97Q9P2B7 532 aa18.3■□□□□ 0.52
SMG9-210ENST00000600097 A0A0A0MRY4 1105 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.29■□□□□ 0.52
SMG9-210ENST00000600097 CST3P01034 146 aaPredicted RBP18.29■□□□□ 0.52
SMG9-210ENST00000600097 CEACAM1P13688 526 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 CSRP1P21291 193 aaKnown RBP18.29■□□□□ 0.52
SMG9-210ENST00000600097 BCKDHBP21953 392 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 HOXD13P35453 343 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 GRIA2P42262 883 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 SNRPFP62306 86 aaKnown RBP18.29■□□□□ 0.52
SMG9-210ENST00000600097 ZNF252P-AS1Q0IIN9 211 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 BYSLQ13895 437 aaKnown RBP18.29■□□□□ 0.52
SMG9-210ENST00000600097 PSMD6Q15008 389 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 WDR72Q3MJ13 1102 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 EOGTQ5NDL2 527 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 SH3PXD2AQ5TCZ1 1133 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 RHBDF2Q6PJF5 856 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 TMEM92Q6UXU6 159 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 LPCAT2Q7L5N7 544 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 TTC30AQ86WT1 665 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 ALLCQ8N6M5 410 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 IL17RCQ8NAC3 791 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 TXNDC5Q8NBS9 432 aaKnown RBP18.29■□□□□ 0.52
SMG9-210ENST00000600097 PDZD8Q8NEN9 1154 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 ZNF507Q8TCN5 953 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 OVCA2Q8WZ82 227 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 HPS3Q969F9 1004 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 OTUB2Q96DC9 234 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 CGRRF1Q99675 332 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 TRIM9Q9C026 710 aa18.29■□□□□ 0.52
SMG9-210ENST00000600097 EVLQ9UI08 416 aaPredicted RBP18.29■□□□□ 0.52
SMG9-210ENST00000600097 KIAA1549LQ6ZVL6 1849 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 CFAP47Q6ZTR5 3102 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 ABCA7Q8IZY2 2146 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 HELZP42694 1942 aaKnown RBP18.28■□□□□ 0.52
SMG9-210ENST00000600097 E2F8A0AVK6 867 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 A8MXQ7 604 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 CDX4O14627 284 aaPredicted RBP18.28■□□□□ 0.52
SMG9-210ENST00000600097 GIPC1O14908 333 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 RTN3O95197 1032 aaPredicted RBP18.28■□□□□ 0.52
SMG9-210ENST00000600097 KLF8O95600 359 aaPredicted RBP18.28■□□□□ 0.52
SMG9-210ENST00000600097 STAU1O95793 577 aaKnown RBP18.28■□□□□ 0.52
SMG9-210ENST00000600097 MBL2P11226 248 aaPredicted RBP18.28■□□□□ 0.52
SMG9-210ENST00000600097 ADH5P11766 374 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 YWHAQP27348 245 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 P2RY2P41231 377 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 DPP6P42658 865 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 TNFRSF4P43489 277 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 SLC6A11P48066 632 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 NASPP49321 788 aaPredicted RBP18.28■□□□□ 0.52
SMG9-210ENST00000600097 LMAN2Q12907 356 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 SPDYCQ5MJ68 293 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 EPM2AIP1Q7L775 607 aaPredicted RBP18.28■□□□□ 0.52
SMG9-210ENST00000600097 NUP93Q8N1F7 819 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 RDH13Q8NBN7 331 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 PIGKQ92643 395 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 ZNF518BQ9C0D4 1074 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 ARHGEF4Q9NR80 690 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 AGPAT3Q9NRZ7 376 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 NME7Q9Y5B8 376 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 MYO16Q9Y6X6 1858 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 CHD6Q8TD26 2715 aa18.28■□□□□ 0.52
SMG9-210ENST00000600097 ANTXRLA6NF34 631 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 PATE3B3GLJ2 98 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 SGK1O00141 431 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 TNFRSF10BO14763 440 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 MAP3K13O43283 966 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 TGFB1I1O43294 461 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 HNRNPLP14866 589 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMG9-210ENST00000600097 ATICP31939 592 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 TIE1P35590 1138 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 KIR2DL1P43626 348 aaPredicted RBP18.27■□□□□ 0.52
SMG9-210ENST00000600097 CACNA2D1P54289 1103 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 ASIC1P78348 528 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 IRX4P78413 519 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 CYP24A1Q07973 514 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 IFRD2Q12894 506 aaPredicted RBP18.27■□□□□ 0.52
SMG9-210ENST00000600097 TRPC3Q13507 836 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 STK38Q15208 465 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 E2F4Q16254 413 aa18.27■□□□□ 0.52
SMG9-210ENST00000600097 PREPLQ4J6C6 727 aaPredicted RBP18.27■□□□□ 0.52
SMG9-210ENST00000600097 FAM26FQ5R3K3 315 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms