RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 TSPAN16Q9UKR8 245 aa23.2■■□□□ 1.3
LTBP4-227ENST00000600026 ASB3Q9Y575 518 aa23.2■■□□□ 1.3
LTBP4-227ENST00000600026 BEST1O76090 585 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 PTPN2P17706 415 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 EIF4A3P38919 411 aaKnown RBP23.19■■□□□ 1.3
LTBP4-227ENST00000600026 KCNQ1P51787 676 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 MAPK8IP2Q13387 824 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-227ENST00000600026 CBX2Q14781 532 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-227ENST00000600026 AAK1Q2M2I8 961 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 PUS10Q3MIT2 529 aaKnown RBP23.19■■□□□ 1.3
LTBP4-227ENST00000600026 LCLAT1Q6UWP7 414 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 ZNF571Q7Z3V5 609 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-227ENST00000600026 TTC30AQ86WT1 665 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 HS6ST3Q8IZP7 471 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 DDX1Q92499 740 aaKnown RBP23.19■■□□□ 1.3
LTBP4-227ENST00000600026 SPATA17Q96L03 361 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 NECTIN4Q96NY8 510 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 KCNK16Q96T55 309 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.19■■□□□ 1.3
LTBP4-227ENST00000600026 NHEJ1Q9H9Q4 299 aaPredicted RBP23.19■■□□□ 1.3
LTBP4-227ENST00000600026 CSNK1G1Q9HCP0 422 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 PCDHGC3Q9UN70 934 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.19■■□□□ 1.37e-6■■□□□ 11.9
LTBP4-227ENST00000600026 CEP83Q9Y592 693 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 DENND4CQ5VZ89 1909 aa23.19■■□□□ 1.3
LTBP4-227ENST00000600026 CLUHO75153 1309 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 SLC38A8A6NNN8 435 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 TNFRSF10AO00220 468 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 MMEP08473 750 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 PLEKP08567 350 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-227ENST00000600026 NPR3P17342 541 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 MAP3K7CLP57077 242 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 MTMR3Q13615 1198 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 SMAD2Q15796 467 aaKnown RBP23.18■■□□□ 1.3
LTBP4-227ENST00000600026 TJAP1Q5JTD0 557 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 TRIM72Q6ZMU5 477 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 DNAJB7Q7Z6W7 309 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-227ENST00000600026 TMC8Q8IU68 726 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 CEP295NLQ96MC4 621 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 LRRC3Q9BY71 257 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 DUSP16Q9BY84 665 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 POMKQ9H5K3 350 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 ZNF334Q9HCZ1 680 aaPredicted RBP23.18■■□□□ 1.3
LTBP4-227ENST00000600026 WDR6Q9NNW5 1121 aaKnown RBP23.18■■□□□ 1.3
LTBP4-227ENST00000600026 ASAH2Q9NR71 780 aa23.18■■□□□ 1.3
LTBP4-227ENST00000600026 AKR1B10O60218 316 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 MICAL2O94851 1124 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 RHOP08100 348 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 CSH1P0DML2 217 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 CSH2P0DML3 217 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 IL9P15248 144 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 CHRNB2P17787 502 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 CYLC1P35663 651 aaPredicted RBP23.17■■□□□ 1.3
LTBP4-227ENST00000600026 BCAT1P54687 386 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 SLC8A3P57103 927 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 FMO1Q01740 532 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 PABPC1LQ4VXU2 614 aaKnown RBP23.17■■□□□ 1.3
LTBP4-227ENST00000600026 CCDC170Q8IYT3 715 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 ANKRD52Q8NB46 1076 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 ATXN2LQ8WWM7 1075 aaKnown RBP23.17■■□□□ 1.3
LTBP4-227ENST00000600026 XIRP2A4UGR9 3374 aa23.17■■□□□ 1.3
LTBP4-227ENST00000600026 M0QYV0 167 aa23.16■■□□□ 1.3
LTBP4-227ENST00000600026 HMGA1P17096 107 aaKnown RBP23.16■■□□□ 1.3
LTBP4-227ENST00000600026 SSTR3P32745 418 aaPredicted RBP23.16■■□□□ 1.3
LTBP4-227ENST00000600026 EPHA5P54756 1037 aa23.16■■□□□ 1.3
LTBP4-227ENST00000600026 MRPS5P82675 430 aaKnown RBP23.16■■□□□ 1.3
LTBP4-227ENST00000600026 TAF12Q16514 161 aa23.16■■□□□ 1.3
LTBP4-227ENST00000600026 DENND5BQ6ZUT9 1274 aa23.16■■□□□ 1.3
LTBP4-227ENST00000600026 PDZD4Q76G19 769 aaPredicted RBP23.16■■□□□ 1.3
LTBP4-227ENST00000600026 TMEM139Q8IV31 216 aa23.16■■□□□ 1.3
LTBP4-227ENST00000600026 SYT11Q9BT88 431 aa23.16■■□□□ 1.3
LTBP4-227ENST00000600026 MAGED2Q9UNF1 606 aaPredicted RBP23.16■■□□□ 1.3
LTBP4-227ENST00000600026 FAM50BQ9Y247 325 aa23.16■■□□□ 1.3
LTBP4-227ENST00000600026 TCF20Q9UGU0 1960 aaKnown RBP23.15■■□□□ 1.3
LTBP4-227ENST00000600026 LSM8O95777 96 aaKnown RBP23.15■■□□□ 1.3
LTBP4-227ENST00000600026 MYL4P12829 197 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 USP46P62068 366 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 PDE4CQ08493 712 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 BST2Q10589 180 aaKnown RBP23.15■■□□□ 1.3
LTBP4-227ENST00000600026 SLC5A9Q2M3M2 681 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 PKDCCQ504Y2 493 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 PRSS36Q5K4E3 855 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 LEMD2Q8NC56 503 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 TMEM35BQ8NCS4 154 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 UBA3Q8TBC4 463 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 LHX5Q9H2C1 402 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 AVENQ9NQS1 362 aaPredicted RBP23.15■■□□□ 1.3
LTBP4-227ENST00000600026 ADAMTS1Q9UHI8 967 aa23.15■■□□□ 1.3
LTBP4-227ENST00000600026 ANAPC1Q9H1A4 1944 aa23.14■■□□□ 1.3
LTBP4-227ENST00000600026 DOCK8Q8NF50 2099 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 SOWAHDA6NJG2 315 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 HHLA1C9JL84 531 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 TNFRSF10BO14763 440 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 ARHGAP6O43182 974 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 SETSIPP0DME0 302 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 FSHRP23945 695 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 CCR2P41597 374 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 KIF11P52732 1056 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 SLC5A3P53794 718 aa23.14■■□□□ 1.29
LTBP4-227ENST00000600026 CYP4A22Q5TCH4 519 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms