RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 ARGLU1Q9NWB6 273 aaPredicted RBP12.8□□□□□ -0.36
ZNF548-209ENST00000598895 TRMT1Q9NXH9 659 aaKnown RBP12.8□□□□□ -0.36
ZNF548-209ENST00000598895 COQ4Q9Y3A0 265 aa12.8□□□□□ -0.36
ZNF548-209ENST00000598895 ATP8B3O60423 1300 aa12.8□□□□□ -0.36
ZNF548-209ENST00000598895 MYH10P35580 1976 aa12.8□□□□□ -0.36
ZNF548-209ENST00000598895 MUC3AQ02505 3323 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 TECTAO75443 2155 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 ECI2O75521 394 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 BEST1O76090 585 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 PRAMEF12O95522 483 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 ABL1P00519 1130 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 MTIF2P46199 727 aaKnown RBP12.79□□□□□ -0.36
ZNF548-209ENST00000598895 MARSP56192 900 aaKnown RBP12.79□□□□□ -0.36
ZNF548-209ENST00000598895 MAP3K7CLP57077 242 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 CUL2Q13617 745 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 TAF3Q5VWG9 929 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 VITQ6UXI7 678 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 IRF2BP1Q8IU81 584 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 ARID3BQ8IVW6 561 aaPredicted RBP12.79□□□□□ -0.36
ZNF548-209ENST00000598895 ARHGEF19Q8IW93 802 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 PPM1KQ8N3J5 372 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 FLCNQ8NFG4 579 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 MRPS31Q92665 395 aaKnown RBP12.79□□□□□ -0.36
ZNF548-209ENST00000598895 KAT5Q92993 513 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 ELSPBP1Q96BH3 223 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 CYFIP2Q96F07 1278 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
ZNF548-209ENST00000598895 SMARCD1Q96GM5 515 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 SPATA17Q96L03 361 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 C8orf48Q96LL4 319 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 HEXIM2Q96MH2 286 aaKnown RBP12.79□□□□□ -0.36
ZNF548-209ENST00000598895 NT5C1BQ96P26 610 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 SMOQ99835 787 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 GPR88Q9GZN0 384 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 TASP1Q9H6P5 420 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 UXTQ9UBK9 157 aaPredicted RBP12.79□□□□□ -0.36
ZNF548-209ENST00000598895 NCOR1O75376 2440 aa12.79□□□□□ -0.36
ZNF548-209ENST00000598895 MYO16Q9Y6X6 1858 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 KRBA1A5PL33 1030 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 STK25O00506 426 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 DPYSL4O14531 572 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 ARHGAP6O43182 974 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 TRIM21P19474 475 aaKnown RBP12.78□□□□□ -0.36
ZNF548-209ENST00000598895 GDI1P31150 447 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 RAD23BP54727 409 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 ETF1P62495 437 aaKnown RBP12.78□□□□□ -0.36
ZNF548-209ENST00000598895 CETN1Q12798 172 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
ZNF548-209ENST00000598895 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 SUGP1Q8IWZ8 645 aaKnown RBP12.78□□□□□ -0.36
ZNF548-209ENST00000598895 SLC4A11Q8NBS3 891 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 ZMIZ2Q8NF64 920 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 TMEM176AQ96HP8 235 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 MYRFLQ96LU7 910 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 INTS2Q9H0H0 1204 aaKnown RBP12.78□□□□□ -0.36
ZNF548-209ENST00000598895 DMAP1Q9NPF5 467 aaPredicted RBP12.78□□□□□ -0.36
ZNF548-209ENST00000598895 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
ZNF548-209ENST00000598895 ZNF638Q14966 1978 aaKnown RBP12.78□□□□□ -0.36
ZNF548-209ENST00000598895 KMT2EQ8IZD2 1858 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 C2orf78A6NCI8 922 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 CALCAP01258 141 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 FAM200BP0CF97 657 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 PSMC3P17980 439 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 COL9A1P20849 921 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 RFX1P22670 979 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 ERCC5P28715 1186 aaPredicted RBP12.77□□□□□ -0.37
ZNF548-209ENST00000598895 AVPR1AP37288 418 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 VCPP55072 806 aaKnown RBP12.77□□□□□ -0.37
ZNF548-209ENST00000598895 APBA1Q02410 837 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 TAF10Q12962 218 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 YAF2Q8IY57 180 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 CMTM8Q8IZV2 173 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 NUP93Q8N1F7 819 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 FBXL6Q8N531 539 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 SCAMP5Q8TAC9 235 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 TTC8Q8TAM2 541 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 LMO3Q8TAP4 145 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 ZFYVE19Q96K21 471 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 LRRC3BQ96PB8 259 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 SLC22A12Q96S37 553 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 TRMT61BQ9BVS5 477 aaKnown RBP12.77□□□□□ -0.37
ZNF548-209ENST00000598895 THAP9Q9H5L6 903 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 BRD9Q9H8M2 597 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 ARHGEF3Q9NR81 526 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 SLC2A4RGQ9NR83 387 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
ZNF548-209ENST00000598895 GCNT4Q9P109 453 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 WNT16Q9UBV4 365 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 CCL26Q9Y258 94 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 PCDHB4Q9Y5E5 795 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.77□□□□□ -0.37
ZNF548-209ENST00000598895 ANAPC1Q9H1A4 1944 aa12.77□□□□□ -0.37
ZNF548-209ENST00000598895 P4HA2O15460 535 aa12.76□□□□□ -0.37
ZNF548-209ENST00000598895 CKMP06732 381 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms