RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 MAFFQ9ULX9 164 aa16.26■□□□□ 0.19
UPF1-206ENST00000598471 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
UPF1-206ENST00000598471 WDR27A2RRH5 827 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 SIGLEC16A6NMB1 481 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 F8VP50 259 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 MYO1FO00160 1098 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 PIK3R2O00459 728 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 PALMO75781 387 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 BEST1O76090 585 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 MYOGP15173 224 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 RPL17P18621 184 aaKnown RBP16.25■□□□□ 0.19
UPF1-206ENST00000598471 TUFMP49411 452 aaKnown RBP16.25■□□□□ 0.19
UPF1-206ENST00000598471 TKTL1P51854 596 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 CACNA2D1P54289 1103 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 SLC6A3Q01959 620 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 RAB33AQ14088 237 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
UPF1-206ENST00000598471 MGAT5BQ3V5L5 792 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 EFHC1Q5JVL4 640 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 C11orf63Q6NUN7 778 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 RNF19BQ6ZMZ0 732 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 DAAM2Q86T65 1068 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 ATAD1Q8NBU5 361 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 MCEEQ96PE7 176 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 KCNK16Q96T55 309 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 SEPT5Q99719 369 aaPredicted RBP16.25■□□□□ 0.19
UPF1-206ENST00000598471 EMILIN2Q9BXX0 1053 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 RXFP1Q9HBX9 757 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 CNGB3Q9NQW8 809 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 TLR9Q9NR96 1032 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 METTL5Q9NRN9 209 aaKnown RBP16.25■□□□□ 0.19
UPF1-206ENST00000598471 HSFX1Q9UBD0 423 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
UPF1-206ENST00000598471 COG5Q9UP83 839 aa16.25■□□□□ 0.19
UPF1-206ENST00000598471 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.24■□□□□ 0.19
UPF1-206ENST00000598471 TCRBV5S1A1TA0A578 114 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 GRID2IPA4D2P6 1211 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 CTAGE9A4FU28 777 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 ADAM12O43184 909 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 PAPSS1O43252 624 aaPredicted RBP16.24■□□□□ 0.19
UPF1-206ENST00000598471 BUB1BO60566 1050 aaPredicted RBP16.24■□□□□ 0.19
UPF1-206ENST00000598471 CXCL14O95715 111 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 HAPLN1P10915 354 aaPredicted RBP16.24■□□□□ 0.19
UPF1-206ENST00000598471 ELF1P32519 619 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 CDR1P51861 262 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 ERVK-21P61565 698 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 ADCY1Q08828 1119 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 RAB41Q5JT25 222 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 LLGL2Q6P1M3 1020 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 OLFML1Q6UWY5 402 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 KIF18AQ8NI77 898 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 ZNF461Q8TAF7 563 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 SPPL3Q8TCT6 385 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 POF1BQ8WVV4 589 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 ZNF592Q92610 1267 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 GOLGA1Q92805 767 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 CEP295NLQ96MC4 621 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 NAPGQ99747 312 aaPredicted RBP16.24■□□□□ 0.19
UPF1-206ENST00000598471 TCF25Q9BQ70 676 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 TRIM62Q9BVG3 475 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 ALG13Q9NP73 1137 aaKnown RBP16.24■□□□□ 0.19
UPF1-206ENST00000598471 NGRNQ9NPE2 291 aaKnown RBP16.24■□□□□ 0.19
UPF1-206ENST00000598471 IP6K2Q9UHH9 426 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 MTUS1Q9ULD2 1270 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 JRKLQ9Y4A0 524 aa16.24■□□□□ 0.19
UPF1-206ENST00000598471 NLRC5Q86WI3 1866 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 TMEM191CA6NGB0 347 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 TMEM110-MUSTN1A8MSY1 372 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 HHLA1C9JL84 531 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 LILRB3O75022 631 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 ABLIM3O94929 683 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 ADH1AP07327 375 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 GLI1P08151 1106 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 DUSP4Q13115 394 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 MESDQ14696 234 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 PPP1R15BQ5SWA1 713 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 PPP2R2DQ66LE6 453 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 PDE12Q6L8Q7 609 aaKnown RBP16.23■□□□□ 0.19
UPF1-206ENST00000598471 SLC26A9Q7LBE3 791 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 PEX26Q7Z412 305 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 SCUBE3Q8IX30 993 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 SCML4Q8N228 414 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 LRRC57Q8N9N7 239 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.23■□□□□ 0.19
UPF1-206ENST00000598471 FNIP1Q8TF40 1166 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 AUTS2Q8WXX7 1259 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 IRGQQ8WZA9 623 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 WDR24Q96S15 920 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 PBX4Q9BYU1 374 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 ULBP1Q9BZM6 244 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 TMEM30AQ9NV96 361 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 ASNSD1Q9NWL6 643 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 AMFRQ9UKV5 643 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 YBX2Q9Y2T7 364 aaKnown RBP16.23■□□□□ 0.19
UPF1-206ENST00000598471 IRAK3Q9Y616 596 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 RANBP2P49792 3224 aaKnown RBP16.23■□□□□ 0.19
UPF1-206ENST00000598471 TRIOBPQ9H2D6 2365 aa16.23■□□□□ 0.19
UPF1-206ENST00000598471 TEX28O15482 410 aa16.22■□□□□ 0.19
UPF1-206ENST00000598471 HSF2BPO75031 334 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms