RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ABL1P00519 1130 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 CKMP06732 381 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 PRKCSHP14314 528 aaPredicted RBP14.65□□□□□ -0.06
UPF1-205ENST00000598209 CD19P15391 556 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 NPR3P17342 541 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 COL9A1P20849 921 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 ACO1P21399 889 aaKnown RBP14.65□□□□□ -0.06
UPF1-205ENST00000598209 FCHO2Q0JRZ9 810 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 KCNJ12Q14500 433 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 MLF2Q15773 248 aaPredicted RBP14.65□□□□□ -0.06
UPF1-205ENST00000598209 SLC44A4Q53GD3 710 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 SGO2Q562F6 1265 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 CWF19L1Q69YN2 538 aaKnown RBP14.65□□□□□ -0.06
UPF1-205ENST00000598209 PHLDB3Q6NSJ2 640 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 CAVIN1Q6NZI2 390 aaKnown RBP14.65□□□□□ -0.06
UPF1-205ENST00000598209 TRIM65Q6PJ69 517 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 ARL14EPQ8N8R7 260 aaPredicted RBP14.65□□□□□ -0.06
UPF1-205ENST00000598209 PDZD8Q8NEN9 1154 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 BPIFB1Q8TDL5 484 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 OVCA2Q8WZ82 227 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 DNASE1L2Q92874 299 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 IRF7Q92985 503 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 KREMEN1Q96MU8 473 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 CYP2S1Q96SQ9 504 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 TUBGCP2Q9BSJ2 902 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 KIF9Q9HAQ2 790 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 TDP1Q9NUW8 608 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 CCL26Q9Y258 94 aa14.65□□□□□ -0.06
UPF1-205ENST00000598209 FAM92AA1XBS5 289 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 STK25O00506 426 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 CHADO15335 359 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 PAEPP09466 180 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 VDRP11473 427 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 PFKLP17858 780 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 HDCP19113 662 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 SLC9A1P19634 815 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 RFX1P22670 979 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 PDE6CP51160 858 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 VCPP55072 806 aaKnown RBP14.64□□□□□ -0.07
UPF1-205ENST00000598209 PRKCQQ04759 706 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 ZNF268Q14587 947 aaPredicted RBP14.64□□□□□ -0.07
UPF1-205ENST00000598209 EXOC3L4Q17RC7 722 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 VWA3BQ502W6 1294 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 ARHGAP29Q52LW3 1261 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 TCP11X2Q5H9J9 407 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 MIIPQ5JXC2 388 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 ASTLQ6HA08 431 aaPredicted RBP14.64□□□□□ -0.07
UPF1-205ENST00000598209 GPRIN1Q7Z2K8 1008 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 SHDQ96IW2 340 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 NDST4Q9H3R1 872 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 FBXO44Q9H4M3 255 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 TBC1D17Q9HA65 648 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 PNPLA8Q9NP80 782 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 UBE2TQ9NPD8 197 aaPredicted RBP14.64□□□□□ -0.07
UPF1-205ENST00000598209 TRPV5Q9NQA5 729 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 GMIPQ9P107 970 aa14.64□□□□□ -0.07
UPF1-205ENST00000598209 CHORDC1Q9UHD1 332 aaPredicted RBP14.64□□□□□ -0.07
UPF1-205ENST00000598209 RNF225M0QZC1 329 aaPredicted RBP14.63□□□□□ -0.07
UPF1-205ENST00000598209 ARNTLO00327 626 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 OAS1P00973 400 aaKnown RBP14.63□□□□□ -0.07
UPF1-205ENST00000598209 EEF1GP26641 437 aaKnown RBP14.63□□□□□ -0.07
UPF1-205ENST00000598209 PON1P27169 355 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 AVPR2P30518 371 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 CLCN5P51795 746 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 STARD6P59095 220 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 TYRO3Q06418 890 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 GOLGA7BQ2TAP0 167 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 GJB7Q6PEY0 223 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 TTC30AQ86WT1 665 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 ANKRD52Q8NB46 1076 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 RBBP8NLQ8NC74 664 aaPredicted RBP14.63□□□□□ -0.07
UPF1-205ENST00000598209 RIN3Q8TB24 985 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 ZFYVE19Q96K21 471 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 HEBP1Q9NRV9 189 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 THG1LQ9NWX6 298 aaKnown RBP14.63□□□□□ -0.07
UPF1-205ENST00000598209 RAPGEFL1Q9UHV5 662 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 TSPAN16Q9UKR8 245 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 KIAA1257Q9ULG3 409 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 HCN4Q9Y3Q4 1203 aa14.63□□□□□ -0.07
UPF1-205ENST00000598209 O00370 1275 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 PES1O00541 588 aaKnown RBP14.62□□□□□ -0.07
UPF1-205ENST00000598209 ZDHHC11BP0C7U3 371 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 KIF11P52732 1056 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 ZNF132P52740 706 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 BCAT1P54687 386 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 MFAP3P55082 362 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 SLC8A3P57103 927 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 PLCB2Q00722 1185 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 APBA1Q02410 837 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 USP4Q13107 963 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 CDKAL1Q5VV42 579 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 SNX30Q5VWJ9 437 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 TPRG1Q6ZUI0 275 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 ENOSF1Q7L5Y1 443 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 TMEM105Q8N8V8 129 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 TTC16Q8NEE8 873 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 CSGALNACT1Q8TDX6 532 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 TFAP2BQ92481 460 aa14.62□□□□□ -0.07
UPF1-205ENST00000598209 FAM81BQ96LP2 452 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms