RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 PDXKO00764 312 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 IKBKBO14920 756 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 HCRTO43612 131 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 HSP90AA1P07900 732 aaKnown RBP14.48□□□□□ -0.09
TRIM28-211ENST00000597968 ADRB1P08588 477 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 USP46P62068 366 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 ENPEPQ07075 957 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 SRSF5Q13243 272 aaKnown RBP14.48□□□□□ -0.09
TRIM28-211ENST00000597968 DMC1Q14565 340 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 ELF2Q15723 593 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 CCDC142Q17RM4 750 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 PKN3Q6P5Z2 889 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 NELFCDQ8IXH7 590 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 KCNV2Q8TDN2 545 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 FAM84AQ96KN4 292 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 SLC39A2Q9NP94 309 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 VPS45Q9NRW7 570 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 DMAC2Q9NW81 257 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 IL37Q9NZH6 218 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 E2F8A0AVK6 867 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 FAM92AA1XBS5 289 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-211ENST00000597968 MAPK13O15264 365 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 PHACTR2O75167 634 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 ADH1CP00326 375 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 YWHAQP27348 245 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 MYL6P60660 151 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 TAF10Q12962 218 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 PKP1Q13835 747 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 SGSM1Q2NKQ1 1148 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 ZNF699Q32M78 642 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 PLK5Q496M5 336 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 AASDHQ4L235 1098 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-211ENST00000597968 USP39Q53GS9 565 aaKnown RBP14.47□□□□□ -0.09
TRIM28-211ENST00000597968 ZNF667Q5HYK9 610 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 IL31Q6EBC2 164 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 NUDT18Q6ZVK8 323 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 UNC93AQ86WB7 457 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 RASSF3Q86WH2 238 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 USP33Q8TEY7 942 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 ZNF516Q92618 1163 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 SMARCD1Q96GM5 515 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 GZF1Q9H116 711 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-211ENST00000597968 ARRDC1-AS1Q9H2J1 176 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 LINC00597Q9H2U6 94 aa14.47□□□□□ -0.09
TRIM28-211ENST00000597968 ZNF638Q14966 1978 aaKnown RBP14.46□□□□□ -0.09
TRIM28-211ENST00000597968 DCDC2BA2VCK2 349 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 C4BPAP04003 597 aaKnown RBP14.46□□□□□ -0.09
TRIM28-211ENST00000597968 OPRD1P41143 372 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 DGKEP52429 567 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 ZXDBP98169 803 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 BIRC3Q13489 604 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 CUL4BQ13620 913 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 NCOA4Q13772 614 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 KBTBD6Q86V97 674 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 TSTD1Q8NFU3 115 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 TMC2Q8TDI7 906 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 EZH1Q92800 747 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-211ENST00000597968 CNOT6LQ96LI5 555 aaKnown RBP14.46□□□□□ -0.09
TRIM28-211ENST00000597968 PNKPQ96T60 521 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 B3GNT5Q9BYG0 378 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 DNAI2Q9GZS0 605 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 RNF38Q9H0F5 515 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 BLZF1Q9H2G9 400 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 FBXO44Q9H4M3 255 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 DMAP1Q9NPF5 467 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-211ENST00000597968 EXOC1Q9NV70 894 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 NXF1Q9UBU9 619 aaKnown RBP14.46□□□□□ -0.09
TRIM28-211ENST00000597968 MMP17Q9ULZ9 603 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 NME7Q9Y5B8 376 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 CPQQ9Y646 472 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 GREB1Q4ZG55 1949 aa14.46□□□□□ -0.09
TRIM28-211ENST00000597968 K7EQS6 105 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 ALDH1A2O94788 518 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 ZDHHC11BP0C7U3 371 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 CMA1P23946 247 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 MPLP40238 635 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 DPP6P42658 865 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 TNFRSF4P43489 277 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 DHCR24Q15392 516 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 NFIL3Q16649 462 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 ZACNQ401N2 412 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 PPM1JQ5JR12 505 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 SPDYCQ5MJ68 293 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 HECTD3Q5T447 861 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 FILIP1Q7Z7B0 1213 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 CRYBG2Q8N1P7 616 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 FAXDC2Q96IV6 333 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 HHIPQ96QV1 700 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 ZNF518BQ9C0D4 1074 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 DUSP15Q9H1R2 295 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-211ENST00000597968 CSNK1G1Q9HCP0 422 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 PTPRDP23468 1912 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 ANAPC1Q9H1A4 1944 aa14.45□□□□□ -0.1
TRIM28-211ENST00000597968 LRRIQ3A6PVS8 624 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-211ENST00000597968 TNFRSF10BO14763 440 aa14.44□□□□□ -0.1
TRIM28-211ENST00000597968 TM4SF5O14894 197 aa14.44□□□□□ -0.1
TRIM28-211ENST00000597968 ACTN4O43707 911 aaKnown RBP14.44□□□□□ -0.1
TRIM28-211ENST00000597968 KLRC4O43908 158 aa14.44□□□□□ -0.1
TRIM28-211ENST00000597968 APODP05090 189 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms