RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SYN2Q92777 582 aaPredicted RBP23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 AGPAT1Q99943 283 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 LRRC3Q9BY71 257 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 LHX5Q9H2C1 402 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 FBXO44Q9H4M3 255 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 ST7Q9NRC1 585 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 SEPT11Q9NVA2 429 aaKnown RBP23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 COMMD8Q9NX08 183 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 FAM50BQ9Y247 325 aa23.33■■□□□ 1.33
CHMP2A-204ENST00000597848 PTPRDP23468 1912 aa23.33■■□□□ 1.32
CHMP2A-204ENST00000597848 CLUHO75153 1309 aa23.33■■□□□ 1.32
CHMP2A-204ENST00000597848 FGF19O95750 216 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 SKILP12757 684 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 CHRNB2P17787 502 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 GABRR2P28476 465 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 ADKP55263 362 aaKnown RBP23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 GOLGA8FQ08AF8 430 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 GOLGA8DPQ0D2H9 430 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 TBX2Q13207 712 aaPredicted RBP23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 TMC8Q8IU68 726 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 TMEM35BQ8NCS4 154 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 OR8K1Q8NGG5 319 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 FBXO32Q969P5 355 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 TRMT2BQ96GJ1 504 aaKnown RBP23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 MYRFLQ96LU7 910 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 NOX5Q96PH1 765 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 GCNAQ96QF7 691 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 ATXN3LQ9H3M9 355 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 POMKQ9H5K3 350 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 HAUS4Q9H6D7 363 aa23.32■■□□□ 1.32
CHMP2A-204ENST00000597848 AKR1B15C9JRZ8 316 aaPredicted RBP23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 LCP1P13796 627 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 GJA1P17302 382 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 TNFAIP3P21580 790 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 TKTL1P51854 596 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 KIF11P52732 1056 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 EPHA5P54756 1037 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 FMO1Q01740 532 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 TAF10Q12962 218 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 SIX6OS1Q8N1H7 587 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 WDTC1Q8N5D0 677 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 C1orf131Q8NDD1 294 aaKnown RBP23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 KCTD13Q8WZ19 329 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 TCEAL4Q96EI5 215 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 HSFY1Q96LI6 401 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 SLITRK1Q96PX8 696 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 TTLL2Q9BWV7 592 aa23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 AVENQ9NQS1 362 aaPredicted RBP23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 ZNHIT6Q9NWK9 470 aaKnown RBP23.31■■□□□ 1.32
CHMP2A-204ENST00000597848 A0A1W2PRU2 124 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 FAM170AA1A519 330 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 PIK3R2O00459 728 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 MFAP3LO75121 409 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 CDC25BP30305 580 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 CDC25CP30307 473 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 CCR2P41597 374 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 PRKCIP41743 596 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 ADIGQ0VDE8 80 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 SLC5A9Q2M3M2 681 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 TDRD12Q587J7 1177 aaKnown RBP23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 PRSS36Q5K4E3 855 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 GAREM2Q75VX8 874 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 GET4Q7L5D6 327 aaPredicted RBP23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 CNGA4Q8IV77 575 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 ITFG1Q8TB96 612 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 STK32AQ8WU08 396 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 ING5Q8WYH8 240 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 IL21Q9HBE4 155 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 IL37Q9NZH6 218 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 TRPM5Q9NZQ8 1165 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 CYTH4Q9UIA0 394 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 BZW2Q9Y6E2 419 aaKnown RBP23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 MYH10P35580 1976 aa23.3■■□□□ 1.32
CHMP2A-204ENST00000597848 LSM8O95777 96 aaKnown RBP23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 ABL1P00519 1130 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 F11P03951 625 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 SERPING1P05155 500 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 KCNQ1P51787 676 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 MRPS5P82675 430 aaKnown RBP23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 PDCLQ13371 301 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 SMAD2Q15796 467 aaKnown RBP23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 RAB41Q5JT25 222 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 TRIM72Q6ZMU5 477 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 SPC24Q8NBT2 197 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 SHKBP1Q8TBC3 707 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 PPP1R13BQ96KQ4 1090 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 DNAJC7Q99615 494 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 SYNCQ9H7C4 482 aa23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 CHORDC1Q9UHD1 332 aaPredicted RBP23.29■■□□□ 1.32
CHMP2A-204ENST00000597848 USP17L7P0C7H9 530 aa23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 ACADSBP45954 432 aa23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 TEAD2Q15562 447 aa23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 ARHGAP15Q53QZ3 475 aa23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 NAA35Q5VZE5 725 aa23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 ZNF571Q7Z3V5 609 aaPredicted RBP23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 PDZD8Q8NEN9 1154 aa23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 ATXN2LQ8WWM7 1075 aaKnown RBP23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 CPA5Q8WXQ8 436 aa23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 MRPS31Q92665 395 aaKnown RBP23.28■■□□□ 1.32
CHMP2A-204ENST00000597848 PCDHB18PQ96TA0 734 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms